Protein : Qrob_P0363750.2 Q. robur
Protein Identifier  ? Qrob_P0363750.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) K15407 - queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29] Code Enzyme  EC:2.4.2.29
Gene Prediction Quality  validated Protein length 

Sequence

Length: 398  
Kegg Orthology  K15407
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006400 tRNA modification The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
GO:0008479 queuine tRNA-ribosyltransferase activity Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine.
GO:0008616 queuosine biosynthetic process The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102624314 1 395 + 395 none 99.50 397 78.48 0.0 queuine tRNA-ribosyltransferase subunit qtrtd1-like
blastp_kegg lcl|vvi:100267045 1 397 + 397 none 99.50 399 78.34 0.0 queuine tRNA-ribosyltransferase subunit QTRTD1-like
blastp_kegg lcl|tcc:TCM_036201 1 395 + 395 none 97.53 405 77.47 0.0 Uncharacterized protein isoform 1
blastp_kegg lcl|fve:101290768 1 394 + 394 none 98.25 401 75.63 0.0 queuine tRNA-ribosyltransferase subunit QTRTD1-like
blastp_kegg lcl|pmum:103319336 1 386 + 386 Gaps:4 96.71 395 79.58 0.0 queuine tRNA-ribosyltransferase subunit QTRTD1-like
blastp_kegg lcl|csv:101223024 1 388 + 388 none 97.24 399 76.29 0.0 queuine tRNA-ribosyltransferase subunit qtrtd1-like
blastp_kegg lcl|cmo:103485379 1 388 + 388 none 97.24 399 75.52 0.0 queuine tRNA-ribosyltransferase subunit qtrtd1-like
blastp_kegg lcl|pop:POPTR_0019s10480g 1 397 + 397 Gaps:6 100.00 399 76.44 0.0 POPTRDRAFT_574205 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa023702mg 1 386 + 386 Gaps:4 96.71 395 79.32 0.0 hypothetical protein
blastp_kegg lcl|gmx:100778880 1 387 + 387 Gaps:3 96.76 401 75.00 0.0 queuine tRNA-ribosyltransferase subunit qtrtd1-like
blastp_pdb 2ash_D 1 384 + 384 Gaps:34 94.49 381 30.28 9e-40 mol:protein length:381 Queuine tRNA-ribosyltransferase
blastp_pdb 2ash_C 1 384 + 384 Gaps:34 94.49 381 30.28 9e-40 mol:protein length:381 Queuine tRNA-ribosyltransferase
blastp_pdb 2ash_B 1 384 + 384 Gaps:34 94.49 381 30.28 9e-40 mol:protein length:381 Queuine tRNA-ribosyltransferase
blastp_pdb 2ash_A 1 384 + 384 Gaps:34 94.49 381 30.28 9e-40 mol:protein length:381 Queuine tRNA-ribosyltransferase
blastp_pdb 1wke_A 7 382 + 376 Gaps:37 93.01 386 26.74 3e-32 mol:protein length:386 TRNA-GUANINE TRANSGLYCOSYLASE
blastp_pdb 1wkd_A 7 382 + 376 Gaps:37 93.01 386 26.74 3e-32 mol:protein length:386 TRNA-GUANINE TRANSGLYCOSYLASE
blastp_pdb 1efz_A 7 382 + 376 Gaps:37 93.01 386 26.46 1e-31 mol:protein length:386 TRNA-GUANINE TRANSGLYCOSYLASE
blastp_pdb 3hfy_A 7 382 + 376 Gaps:33 93.01 386 25.63 1e-31 mol:protein length:386 Queuine tRNA-ribosyltransferase
blastp_pdb 3v0y_A 7 382 + 376 Gaps:37 93.01 386 26.46 2e-31 mol:protein length:386 Queuine tRNA-ribosyltransferase
blastp_pdb 3s1g_A 7 382 + 376 Gaps:37 93.01 386 26.46 2e-31 mol:protein length:386 Queuine tRNA-ribosyltransferase
blastp_uniprot_sprot sp|Q7ZVJ6|QTRD1_DANRE 25 387 + 363 Gaps:46 93.51 416 33.93 6e-56 Queuine tRNA-ribosyltransferase subunit qtrtd1 OS Danio rerio GN qtrtd1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5R998|QTRD1_PONAB 1 381 + 381 Gaps:60 99.52 415 33.17 9e-56 Queuine tRNA-ribosyltransferase subunit QTRTD1 OS Pongo abelii GN QTRTD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9H974|QTRD1_HUMAN 1 381 + 381 Gaps:60 99.52 415 33.41 3e-55 Queuine tRNA-ribosyltransferase subunit QTRTD1 OS Homo sapiens GN QTRTD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5ZM96|QTRD1_CHICK 81 388 + 308 Gaps:36 80.47 425 33.63 5e-54 Queuine tRNA-ribosyltransferase subunit QTRTD1 OS Gallus gallus GN QTRTD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q28DX0|QTRD1_XENTR 1 375 + 375 Gaps:44 97.09 413 34.91 1e-53 Queuine tRNA-ribosyltransferase subunit qtrtd1 OS Xenopus tropicalis GN qtrtd1 PE 2 SV 1
blastp_uniprot_sprot sp|B8ZXI1|QTRD1_MOUSE 122 378 + 257 Gaps:30 69.16 415 37.98 5e-53 Queuine tRNA-ribosyltransferase subunit QTRTD1 OS Mus musculus GN Qtrtd1 PE 1 SV 2
blastp_uniprot_sprot sp|B7Q5K1|QTRD1_IXOSC 1 368 + 368 Gaps:21 96.70 394 30.71 1e-50 Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog OS Ixodes scapularis GN ISCW021855 PE 3 SV 1
blastp_uniprot_sprot sp|Q6DF96|QTRD1_XENLA 1 376 + 376 Gaps:44 97.35 415 32.67 6e-50 Queuine tRNA-ribosyltransferase subunit qtrtd1 OS Xenopus laevis GN qtrtd1 PE 2 SV 1
blastp_uniprot_sprot sp|B3RNT0|QTRD1_TRIAD 1 382 + 382 Gaps:55 99.46 369 34.33 4e-48 Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog OS Trichoplax adhaerens GN TRIADDRAFT_53275 PE 3 SV 1
blastp_uniprot_sprot sp|B0WAN0|QTRD1_CULQU 1 370 + 370 Gaps:37 87.88 429 31.83 1e-43 Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog OS Culex quinquefasciatus GN CPIJ003941 PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 130 383 254 PF01702 "MetaCyc:PWY-6700","UniPathway:UPA00392" Queuine tRNA-ribosyltransferase IPR002616
TIGRFAM 11 384 374 TIGR00449 "MetaCyc:PWY-6700","UniPathway:UPA00392" tgt_general: tRNA-guanine family transglycosylase IPR002616
SUPERFAMILY 1 384 384 SSF51713 "MetaCyc:PWY-6700","UniPathway:UPA00392" none IPR002616
Gene3D 1 384 384 G3DSA:3.20.20.105 "MetaCyc:PWY-6700","UniPathway:UPA00392" none IPR002616
PANTHER 1 388 388 PTHR11962 "MetaCyc:PWY-6700","UniPathway:UPA00392";signature_desc=QUEUINE TRNA-RIBOSYLTRANSFERASE none IPR002616

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL8_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BXT7R_864 29.91 0 47,18 lod 7.0997 0.044
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting