Protein : Qrob_P0361780.2 Q. robur

Protein Identifier  ? Qrob_P0361780.2 Organism . Name  Quercus robur
Score  58.3 Score Type  egn
Protein Description  (M=3) PTHR23076:SF58 - FTSH EXTRACELLULAR PROTEASE FAMILY PROTEIN (PTHR23076:SF58) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 141  

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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101232501 5 140 + 136 none 53.12 256 86.76 2e-82 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|fve:101297468 4 131 + 128 none 10.09 1269 92.19 7e-78 uncharacterized protein LOC101297468
blastp_kegg lcl|cmo:103487285 5 132 + 128 none 9.67 1323 92.19 2e-76 uncharacterized LOC103487285
blastp_kegg lcl|cic:CICLE_v100305692m 4 131 + 128 none 35.65 359 84.38 3e-76 hypothetical protein
blastp_kegg lcl|pmum:103318718 4 131 + 128 none 10.04 1275 89.06 5e-76 uncharacterized LOC103318718
blastp_kegg lcl|pper:PRUPE_ppa000333mg 4 131 + 128 none 10.03 1276 89.06 6e-76 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G116400g 5 133 + 129 none 10.75 1200 88.37 8e-76 hypothetical protein
blastp_kegg lcl|csv:101207174 5 138 + 134 Gaps:1 10.02 1328 88.72 2e-75 uncharacterized LOC101207174
blastp_kegg lcl|gmx:100794385 5 132 + 128 none 9.94 1288 89.06 3e-75 uncharacterized LOC100794385
blastp_kegg lcl|tcc:TCM_026140 5 132 + 128 none 9.78 1309 90.62 4e-75 Metalloprotease m41 ftsh putative isoform 1
blastp_uniprot_sprot sp|P72991|FTSH3_SYNY3 18 116 + 99 Gaps:7 15.58 616 35.42 2e-07 ATP-dependent zinc metalloprotease FtsH 3 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH3 PE 1 SV 1
blastp_uniprot_sprot sp|C8WEG0|FTSH_ZYMMN 5 119 + 115 Gaps:10 16.47 662 32.11 5e-07 ATP-dependent zinc metalloprotease FtsH OS Zymomonas mobilis subsp. mobilis (strain NCIB 11163) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q9FH02|FTSH5_ARATH 6 117 + 112 Gaps:7 15.48 704 32.11 3e-06 ATP-dependent zinc metalloprotease FTSH 5 chloroplastic OS Arabidopsis thaliana GN FTSH5 PE 1 SV 1
blastp_uniprot_sprot sp|A0LN68|FTSH_SYNFM 14 126 + 113 Gaps:7 16.38 647 30.19 3e-06 ATP-dependent zinc metalloprotease FtsH OS Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q5Z974|FTSH1_ORYSJ 18 117 + 100 Gaps:7 14.14 686 32.99 7e-06 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Oryza sativa subsp. japonica GN FTSH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39102|FTSH1_ARATH 6 117 + 112 Gaps:7 15.22 716 31.19 9e-06 ATP-dependent zinc metalloprotease FTSH 1 chloroplastic OS Arabidopsis thaliana GN FTSH1 PE 1 SV 2

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 14 130 117 PF01434 none Peptidase family M41 IPR000642
PANTHER 5 126 122 PTHR23076:SF58 none none none
SUPERFAMILY 6 131 126 SSF140990 none none none
PANTHER 5 126 122 PTHR23076 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting