Protein : Qrob_P0358850.2 Q. robur
Protein Identifier  ? Qrob_P0358850.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PF01348//PF01824 - Type II intron maturase // MatK/TrnK amino terminal region Gene Prediction Quality  validated
Protein length 

Sequence

Length: 505  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006397 mRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
GO:0009507 chloroplast A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:18667994 1 504 + 504 Gaps:6 100.00 506 73.72 0.0 matK CP95_p086 maturase K
blastp_kegg lcl|pper:PrpeC_p002 1 504 + 504 Gaps:6 100.00 506 73.52 0.0 matK maturase K
blastp_kegg lcl|vvi:4025120 1 504 + 504 Gaps:2 100.00 502 72.71 0.0 matK ViviCp002 maturase K
blastp_kegg lcl|rcu:RCOM_ORF00005 1 504 + 504 Gaps:2 100.00 506 72.53 0.0 matK maturase K
blastp_kegg lcl|fve:10251482 1 504 + 504 Gaps:4 100.00 500 68.80 0.0 matK FvH4_C0004 maturase K
blastp_kegg lcl|pop:Poptr_cp002 1 504 + 504 Gaps:4 99.61 510 69.88 0.0 matK maturase K
blastp_kegg lcl|tcc:ThcaC_p002 1 504 + 504 Gaps:4 100.00 502 69.52 0.0 matK maturase K
blastp_kegg lcl|mtr:MetrCp075 1 504 + 504 Gaps:2 100.00 506 67.39 0.0 matK maturase K
blastp_kegg lcl|mtr:MTR_3g035685 1 504 + 504 Gaps:2 100.00 506 67.39 0.0 Maturase K
blastp_kegg lcl|sot:4099949 1 504 + 504 Gaps:5 100.00 509 66.99 0.0 matK SotuCp002 maturase K
blastp_uniprot_sprot sp|Q75VB1|MATK_QUELY 1 504 + 504 none 100.00 504 100.00 0.0 Maturase K OS Quercus lyrata GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA8|MATK_QUEPE 1 504 + 504 none 100.00 504 99.80 0.0 Maturase K OS Quercus petraea GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB3|MATK_QUEGA 1 504 + 504 none 100.00 504 99.60 0.0 Maturase K OS Quercus gamelliflora GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB5|MATK_QUECE 1 504 + 504 none 100.00 504 99.40 0.0 Maturase K OS Quercus cerris GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q8M920|MATK_QUERO 1 504 + 504 none 100.00 504 99.40 0.0 Maturase K OS Quercus robur GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA5|MATK_QUESU 1 504 + 504 none 100.00 504 99.21 0.0 Maturase K OS Quercus suber GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q7YM14|MATK_QUERU 1 504 + 504 none 100.00 504 98.61 0.0 Maturase K OS Quercus rubra GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VA9|MATK_QUEPA 1 504 + 504 none 100.00 504 98.61 0.0 Maturase K OS Quercus palustris GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB2|MATK_QUEIL 1 504 + 504 none 100.00 504 98.41 0.0 Maturase K OS Quercus ilex GN matK PE 3 SV 1
blastp_uniprot_sprot sp|Q75VB4|MATK_QUECO 1 504 + 504 none 100.00 504 98.41 0.0 Maturase K OS Quercus coccifera GN matK PE 3 SV 1
rpsblast_cdd gnl|CDD|176947 1 504 + 504 none 100.00 504 75.20 0.0 CHL00002 matK maturase K.
rpsblast_cdd gnl|CDD|110795 1 330 + 330 none 99.70 331 77.27 1e-160 pfam01824 MatK_N MatK/TrnK amino terminal region. The function of this region is unknown.
rpsblast_cdd gnl|CDD|110356 360 496 + 137 Gaps:3 98.59 142 51.43 4e-38 pfam01348 Intron_maturas2 Type II intron maturase. Group II introns use intron-encoded reverse transcriptase maturase and DNA endonuclease activities for site-specific insertion into DNA. Although this type of intron is self splicing in vitro they require a maturase protein for splicing in vivo. It has been shown that a specific region of the aI2 intron is needed for the maturase function. This region was found to be conserved in group II introns and called domain X.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 1 330 330 PF01824 none MatK/TrnK amino terminal region IPR024942
Hamap 1 504 504 MF_01390 none Maturase K [matK]. IPR002866
Pfam 359 495 137 PF01348 none Type II intron maturase IPR024937

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting