Protein : Qrob_P0357150.2 Q. robur
Protein Identifier  ? Qrob_P0357150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23076:SF56 - AAA-TYPE ATPASE FAMILY PROTEIN (PTHR23076:SF56) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 887  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_028857 4 877 + 874 Gaps:16 98.97 877 81.45 0.0 Cell division protein ftsH putative isoform 1
blastp_kegg lcl|pxb:103944832 44 886 + 843 Gaps:6 94.58 885 82.68 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_kegg lcl|mdm:103443832 44 886 + 843 Gaps:6 94.15 889 82.80 0.0 ATP-dependent zinc metalloprotease FtsH
blastp_kegg lcl|pmum:103327854 34 879 + 846 Gaps:7 95.12 882 82.00 0.0 uncharacterized LOC103327854
blastp_kegg lcl|pper:PRUPE_ppa001203mg 34 879 + 846 Gaps:7 95.12 882 82.60 0.0 hypothetical protein
blastp_kegg lcl|vvi:100251534 2 882 + 881 Gaps:23 99.10 888 78.64 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|pop:POPTR_0003s04910g 4 884 + 881 Gaps:12 98.76 890 77.47 0.0 POPTRDRAFT_413838 FtsH protease family protein
blastp_kegg lcl|rcu:RCOM_1491270 4 879 + 876 Gaps:16 99.32 884 77.33 0.0 Cell division protein ftsH putative (EC:3.6.4.3)
blastp_kegg lcl|gmx:100787999 8 884 + 877 Gaps:20 98.87 883 76.75 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_kegg lcl|cit:102628572 16 878 + 863 Gaps:14 97.17 884 76.83 0.0 ATP-dependent zinc metalloprotease FtsH-like
blastp_pdb 2cea_F 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_E 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_D 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_C 417 846 + 430 Gaps:26 93.28 476 43.02 2e-100 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|Q2JNP0|FTSH_SYNJB 379 847 + 469 Gaps:44 74.45 638 43.79 1e-104 ATP-dependent zinc metalloprotease FtsH OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|P72991|FTSH3_SYNY3 389 846 + 458 Gaps:46 75.65 616 42.70 1e-102 ATP-dependent zinc metalloprotease FtsH 3 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH3 PE 1 SV 1
blastp_uniprot_sprot sp|Q10ZF7|FTSH_TRIEI 389 862 + 474 Gaps:38 72.26 667 41.70 1e-99 ATP-dependent zinc metalloprotease FtsH OS Trichodesmium erythraeum (strain IMS101) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q8YMZ8|FTSH_NOSS1 389 846 + 458 Gaps:41 70.27 656 42.95 4e-99 ATP-dependent zinc metalloprotease FtsH OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|Q9WZ49|FTSH_THEMA 389 846 + 458 Gaps:37 75.90 610 42.98 3e-98 ATP-dependent zinc metalloprotease FtsH OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN ftsH PE 1 SV 1
blastp_uniprot_sprot sp|Q67JH0|FTSH3_SYMTH 390 837 + 448 Gaps:34 72.20 626 43.58 4e-97 ATP-dependent zinc metalloprotease FtsH 3 OS Symbiobacterium thermophilum (strain T / IAM 14863) GN ftsH3 PE 3 SV 1
blastp_uniprot_sprot sp|P73179|FTSH1_SYNY3 389 847 + 459 Gaps:41 69.47 665 41.99 2e-96 ATP-dependent zinc metalloprotease FtsH 1 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN ftsH1 PE 2 SV 1
blastp_uniprot_sprot sp|B4U7U4|FTSH_HYDS0 389 850 + 462 Gaps:40 72.96 636 41.59 3e-96 ATP-dependent zinc metalloprotease FtsH OS Hydrogenobaculum sp. (strain Y04AAS1) GN ftsH PE 3 SV 1
blastp_uniprot_sprot sp|P37476|FTSH_BACSU 391 852 + 462 Gaps:37 74.57 637 42.53 7e-96 ATP-dependent zinc metalloprotease FtsH OS Bacillus subtilis (strain 168) GN ftsH PE 1 SV 1
blastp_uniprot_sprot sp|A0LN68|FTSH_SYNFM 385 847 + 463 Gaps:28 74.03 647 40.71 2e-95 ATP-dependent zinc metalloprotease FtsH OS Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN ftsH PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 669 845 177 PF01434 none Peptidase family M41 IPR000642
SMART 452 591 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 600 662 63 G3DSA:1.10.8.60 none none none
Coils 328 376 49 Coil none none none
SUPERFAMILY 671 848 178 SSF140990 none none none
Coils 232 295 64 Coil none none none
SUPERFAMILY 412 657 246 SSF52540 none none IPR027417
PANTHER 231 883 653 PTHR23076 none none none
Gene3D 415 599 185 G3DSA:3.40.50.300 none none IPR027417
PRINTS 460 479 20 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
PRINTS 763 782 20 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none
Phobius 332 886 555 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 231 883 653 PTHR23076:SF56 none none none
Phobius 311 331 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 456 588 133 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Phobius 1 310 310 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting