Protein : Qrob_P0353980.2 Q. robur
Protein Identifier  ? Qrob_P0353980.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=2) PTHR31081:SF2 - UREIDE PERMEASE 1-RELATED (PTHR31081:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 499  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0071705 nitrogen compound transport The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

17 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011542 29 498 + 470 Gaps:47 91.76 461 79.20 0.0 Ureide permease 1 isoform 4
blastp_kegg lcl|cam:101513655 54 498 + 445 Gaps:43 93.93 428 81.84 0.0 ureide permease 2-like
blastp_kegg lcl|pop:POPTR_0008s09510g 55 498 + 444 Gaps:40 100.00 404 80.69 0.0 POPTRDRAFT_421134 hypothetical protein
blastp_kegg lcl|sly:101257994 55 498 + 444 Gaps:37 100.00 407 77.89 0.0 ureide permease 2-like
blastp_kegg lcl|sot:102595306 55 498 + 444 Gaps:37 100.00 407 77.64 0.0 ureide permease 2-like
blastp_kegg lcl|fve:101311562 55 498 + 444 Gaps:43 100.00 401 78.05 0.0 ureide permease 2-like
blastp_kegg lcl|cam:101514412 55 498 + 444 Gaps:44 100.00 400 81.50 0.0 ureide permease 1-like
blastp_kegg lcl|mtr:MTR_5g045520 55 498 + 444 Gaps:43 99.75 402 80.30 0.0 Ureide permease
blastp_kegg lcl|vvi:100252466 55 498 + 444 Gaps:50 99.75 397 81.06 0.0 ureide permease 2-like
blastp_kegg lcl|rcu:RCOM_1620850 55 498 + 444 Gaps:38 100.00 406 79.80 0.0 Ureide permease putative
blastp_uniprot_sprot sp|Q9ZPR7|UPS1_ARATH 55 498 + 444 Gaps:54 100.00 390 79.49 0.0 Ureide permease 1 OS Arabidopsis thaliana GN UPS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZQ89|UPS2_ARATH 55 498 + 444 Gaps:46 100.00 398 76.88 0.0 Ureide permease 2 OS Arabidopsis thaliana GN UPS2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZQ88|UPS4_ARATH 55 498 + 444 Gaps:43 100.00 401 70.57 0.0 Ureide permease 4 OS Arabidopsis thaliana GN UPS4 PE 2 SV 2
blastp_uniprot_sprot sp|Q41706|UPSA3_VIGUN 56 474 + 419 Gaps:46 99.73 376 72.27 0.0 Probable ureide permease A3 (Fragment) OS Vigna unguiculata GN A3 PE 2 SV 2
blastp_uniprot_sprot sp|Q93Z75|UPS5_ARATH 48 498 + 451 Gaps:47 98.79 413 68.87 0.0 Ureide permease 5 OS Arabidopsis thaliana GN UPS5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZPR6|UPS3_ARATH 55 345 + 291 Gaps:35 100.00 256 75.00 4e-129 Ureide permease 3 OS Arabidopsis thaliana GN UPS3 PE 2 SV 2
rpsblast_cdd gnl|CDD|191696 68 425 + 358 Gaps:22 100.00 336 77.98 1e-168 pfam07168 Ureide_permease Ureide permease. Heterocyclic nitrogen compounds may serve as nitrogen sources or nitrogen transport compounds in plants that are not able to fix nitrogen. This family represents ureide permease a transporter of a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds including allantoin uric acid and xanthine it has 10 putative transmembrane domains with a large cytosolic central domain containing a 'Walker A' motif. Ureide permease is likely to transport other purine degradation products when nitrogen sources are low. Transport is dependent on glucose and a proton gradient. The family is found in bacteria plants and yeast.

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 96 115 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 161 184 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 392 411 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 439 461 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 47 425 379 PTHR31081:SF2 none none IPR030189
PANTHER 449 498 50 PTHR31081:SF2 none none IPR030189
Phobius 155 160 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 116 134 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 372 391 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 62 84 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 19 61 43 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 85 95 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 196 220 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 47 425 379 PTHR31081 none none none
Phobius 462 472 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 221 305 85 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 449 498 50 PTHR31081 none none none
Phobius 328 346 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 347 371 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 473 492 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 68 425 358 PF07168 none Ureide permease IPR009834
Phobius 493 498 6 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 185 195 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 306 327 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 135 154 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 412 438 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

10 Localization

Analysis Start End Length
TMHMM 197 219 22
TMHMM 160 182 22
TMHMM 473 495 22
TMHMM 347 369 22
TMHMM 305 327 22
TMHMM 439 461 22
TMHMM 96 118 22
TMHMM 390 412 22
TMHMM 62 84 22
TMHMM 138 155 17

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting