Protein : Qrob_P0352670.2 Q. robur
Protein Identifier  ? Qrob_P0352670.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR18929:SF38 - PREDICTED: SIMILAR TO PROTEIN DISULFIDE ISOMERASE-ASSOCIATED 6 Alias (in v1)  Qrob_P0487720.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 434  
Kegg Orthology  K09584
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s15820g 1 433 + 433 Gaps:1 100.00 434 87.10 0.0 POPTRDRAFT_246818 thioredoxin family protein
blastp_kegg lcl|cam:101508932 8 433 + 426 Gaps:4 98.62 436 88.37 0.0 protein disulfide isomerase-like 2-3-like
blastp_kegg lcl|pxb:103955002 1 433 + 433 Gaps:2 100.00 435 86.67 0.0 protein disulfide isomerase-like 2-3
blastp_kegg lcl|fve:101296307 1 433 + 433 Gaps:1 99.31 437 85.25 0.0 protein disulfide isomerase-like 2-3-like
blastp_kegg lcl|pmum:103329165 6 433 + 428 Gaps:2 93.68 459 86.05 0.0 protein disulfide isomerase-like 2-3
blastp_kegg lcl|mtr:MTR_5g084930 8 433 + 426 Gaps:3 98.62 435 85.78 0.0 Protein disulfide isomerase family
blastp_kegg lcl|pper:PRUPE_ppa005396mg 6 433 + 428 Gaps:2 92.87 463 85.81 0.0 hypothetical protein
blastp_kegg lcl|mdm:103442667 1 433 + 433 Gaps:2 100.00 435 85.52 0.0 protein disulfide isomerase-like 2-3
blastp_kegg lcl|cmo:103496347 18 433 + 416 Gaps:3 95.66 438 87.83 0.0 protein disulfide isomerase-like 2-3
blastp_kegg lcl|csv:101221066 1 433 + 433 Gaps:5 100.00 438 84.70 0.0 protein disulfide-isomerase like 2-2-like
blastp_pdb 3idv_A 31 262 + 232 Gaps:25 90.87 241 42.01 8e-45 mol:protein length:241 Protein disulfide-isomerase A4
blastp_pdb 2dml_A 24 265 + 242 Gaps:1 87.69 130 66.67 4e-36 mol:protein length:130 Protein disulfide-isomerase A6
blastp_pdb 1x5d_A 26 278 + 253 Gaps:12 97.74 133 59.23 3e-31 mol:protein length:133 Protein disulfide-isomerase A6
blastp_pdb 3ed3_B 24 248 + 225 Gaps:44 80.20 298 35.56 6e-26 mol:protein length:298 Protein disulfide-isomerase MPD1
blastp_pdb 3ed3_A 24 248 + 225 Gaps:44 80.20 298 35.56 6e-26 mol:protein length:298 Protein disulfide-isomerase MPD1
blastp_pdb 3apo_A 20 284 + 265 Gaps:106 66.54 780 39.11 7e-26 mol:protein length:780 DnaJ homolog subfamily C member 10
blastp_pdb 2alb_A 29 262 + 234 Gaps:5 94.69 113 56.07 1e-24 mol:protein length:113 Protein disulfide-isomerase A3
blastp_pdb 3f8u_C 29 321 + 293 Gaps:63 86.49 481 36.78 2e-24 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 29 321 + 293 Gaps:63 86.49 481 36.78 2e-24 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3boa_A 22 268 + 247 Gaps:30 52.78 504 46.62 3e-21 mol:protein length:504 Protein disulfide-isomerase
blastp_uniprot_sprot sp|Q9MAU6|PDI22_ARATH 2 433 + 432 Gaps:13 99.55 447 75.96 0.0 Protein disulfide-isomerase like 2-2 OS Arabidopsis thaliana GN PDIL2-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q67UF5|PDI23_ORYSJ 23 433 + 411 Gaps:8 95.01 441 80.91 0.0 Protein disulfide isomerase-like 2-3 OS Oryza sativa subsp. japonica GN PDIL2-3 PE 2 SV 1
blastp_uniprot_sprot sp|O48773|PDI23_ARATH 15 433 + 419 Gaps:6 96.59 440 77.41 0.0 Protein disulfide-isomerase 2-3 OS Arabidopsis thaliana GN PDIL2-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q15084|PDIA6_HUMAN 9 433 + 425 Gaps:18 98.41 440 45.73 1e-125 Protein disulfide-isomerase A6 OS Homo sapiens GN PDIA6 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R6T1|PDIA6_PONAB 9 433 + 425 Gaps:18 98.41 440 45.73 3e-125 Protein disulfide-isomerase A6 OS Pongo abelii GN PDIA6 PE 2 SV 1
blastp_uniprot_sprot sp|Q922R8|PDIA6_MOUSE 9 433 + 425 Gaps:18 98.41 440 45.50 6e-124 Protein disulfide-isomerase A6 OS Mus musculus GN Pdia6 PE 1 SV 3
blastp_uniprot_sprot sp|Q63081|PDIA6_RAT 9 433 + 425 Gaps:18 98.41 440 45.27 2e-123 Protein disulfide-isomerase A6 OS Rattus norvegicus GN Pdia6 PE 1 SV 2
blastp_uniprot_sprot sp|P38660|PDIA6_MESAU 9 433 + 425 Gaps:19 98.41 439 44.44 1e-120 Protein disulfide-isomerase A6 OS Mesocricetus auratus GN PDIA6 PE 1 SV 1
blastp_uniprot_sprot sp|Q11067|PDIA6_CAEEL 24 414 + 391 Gaps:16 92.50 440 44.47 4e-113 Probable protein disulfide-isomerase A6 OS Caenorhabditis elegans GN tag-320 PE 3 SV 1
blastp_uniprot_sprot sp|Q00216|TIGA_ASPNG 28 347 + 320 Gaps:40 86.91 359 36.86 8e-45 Protein disulfide-isomerase tigA OS Aspergillus niger GN tigA PE 2 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 186 195 10 PR00421 none Thioredoxin family signature none
PRINTS 226 237 12 PR00421 none Thioredoxin family signature none
PRINTS 50 58 9 PR00421 none Thioredoxin family signature none
Pfam 31 131 101 PF00085 none Thioredoxin IPR013766
Pfam 160 259 100 PF00085 none Thioredoxin IPR013766
ProSitePatterns 179 197 19 PS00194 none Thioredoxin family active site. IPR017937
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 156 264 109 SSF52833 none none IPR012336
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
TIGRFAM 34 133 100 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
TIGRFAM 162 262 101 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 409 409 PTHR18929:SF38 none none none
SUPERFAMILY 25 134 110 SSF52833 none none IPR012336
ProSiteProfiles 149 265 117 PS51352 none Thioredoxin domain profile. IPR012336
Phobius 24 433 410 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 51 69 19 PS00194 none Thioredoxin family active site. IPR017937
SUPERFAMILY 270 381 112 SSF52833 none none IPR012336
PANTHER 1 409 409 PTHR18929 none none none
Gene3D 23 137 115 G3DSA:3.40.30.10 none none IPR012336
Gene3D 154 274 121 G3DSA:3.40.30.10 none none IPR012336
ProSiteProfiles 23 139 117 PS51352 none Thioredoxin domain profile. IPR012336

2 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
TMHMM 7 26 19

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting