Protein : Qrob_P0350980.2 Q. robur
Protein Identifier  ? Qrob_P0350980.2 Organism . Name  Quercus robur
Score  85.0 Score Type  egn
Protein Description  (M=2) K03754 - translation initiation factor eIF-2B beta subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 410  
Kegg Orthology  K03754
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_045319 1 409 + 409 Gaps:6 99.52 417 67.95 0.0 NagB/RpiA/CoA transferase-like superfamily protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa006329mg 1 408 + 408 Gaps:6 99.28 417 67.87 0.0 hypothetical protein
blastp_kegg lcl|pda:103716312 1 409 + 409 Gaps:10 100.00 415 67.23 0.0 translation initiation factor eIF-2B subunit beta
blastp_kegg lcl|mus:103971938 1 405 + 405 Gaps:5 99.27 413 67.32 0.0 translation initiation factor eIF-2B subunit beta isoform X1
blastp_kegg lcl|pop:POPTR_0001s06340g 1 409 + 409 Gaps:8 99.52 419 68.35 0.0 POPTRDRAFT_547827 eukaryotic translation initiation factor 2B family protein
blastp_kegg lcl|pop:POPTR_0010s07930g 1 409 + 409 Gaps:5 100.00 412 67.72 0.0 POPTRDRAFT_804823 hypothetical protein
blastp_kegg lcl|vvi:100256712 1 409 + 409 Gaps:6 99.52 417 69.88 0.0 translation initiation factor eIF-2B subunit beta-like
blastp_kegg lcl|fve:101310833 1 409 + 409 Gaps:7 99.52 416 68.60 0.0 translation initiation factor eIF-2B subunit beta-like
blastp_kegg lcl|pxb:103952157 1 407 + 407 Gaps:6 99.76 414 67.31 0.0 translation initiation factor eIF-2B subunit beta-like
blastp_kegg lcl|mdm:103438548 1 407 + 407 Gaps:6 99.76 414 67.31 0.0 translation initiation factor eIF-2B subunit beta-like
blastp_pdb 3vm6_C 169 387 + 219 Gaps:10 61.83 338 32.06 2e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3vm6_B 169 387 + 219 Gaps:10 61.83 338 32.06 2e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3vm6_A 169 387 + 219 Gaps:10 61.83 338 32.06 2e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_F 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_E 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_D 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_C 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_B 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a9c_A 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_pdb 3a11_F 169 387 + 219 Gaps:10 61.83 338 32.06 4e-26 mol:protein length:338 Translation initiation factor eIF-2B delta s
blastp_uniprot_sprot sp|Q54EY2|EI2BB_DICDI 15 402 + 388 Gaps:22 94.33 388 42.90 1e-84 Translation initiation factor eIF-2B subunit beta OS Dictyostelium discoideum GN eif2b2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9UT76|EI2BB_SCHPO 8 403 + 396 Gaps:45 96.95 393 41.47 9e-74 Probable translation initiation factor eIF-2B subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tif222 PE 1 SV 1
blastp_uniprot_sprot sp|Q90511|EI2BB_TAKRU 2 400 + 399 Gaps:64 97.18 355 44.93 1e-70 Translation initiation factor eIF-2B subunit beta OS Takifugu rubripes GN eif2b2 PE 3 SV 1
blastp_uniprot_sprot sp|Q99LD9|EI2BB_MOUSE 23 403 + 381 Gaps:60 91.45 351 44.86 2e-64 Translation initiation factor eIF-2B subunit beta OS Mus musculus GN Eif2b2 PE 2 SV 1
blastp_uniprot_sprot sp|P49770|EI2BB_HUMAN 23 403 + 381 Gaps:62 91.45 351 44.24 1e-63 Translation initiation factor eIF-2B subunit beta OS Homo sapiens GN EIF2B2 PE 1 SV 3
blastp_uniprot_sprot sp|Q5E9B4|EI2BB_BOVIN 23 403 + 381 Gaps:60 91.45 351 44.55 2e-63 Translation initiation factor eIF-2B subunit beta OS Bos taurus GN EIF2B2 PE 2 SV 1
blastp_uniprot_sprot sp|Q28690|EI2BB_RABIT 23 403 + 381 Gaps:60 91.45 351 44.86 3e-63 Translation initiation factor eIF-2B subunit beta OS Oryctolagus cuniculus GN EIF2B2 PE 1 SV 1
blastp_uniprot_sprot sp|Q62818|EI2BB_RAT 7 403 + 397 Gaps:64 97.15 351 43.40 6e-63 Translation initiation factor eIF-2B subunit beta OS Rattus norvegicus GN Eif2b2 PE 2 SV 1
blastp_uniprot_sprot sp|P32502|EI2BB_YEAST 3 408 + 406 Gaps:69 95.80 381 37.26 2e-53 Translation initiation factor eIF-2B subunit beta OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GCD7 PE 1 SV 1
blastp_uniprot_sprot sp|O28242|R15PI_ARCFU 169 394 + 226 Gaps:20 68.37 313 32.24 4e-26 Ribose 1 5-bisphosphate isomerase OS Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN AF_2037 PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 97 95 PTHR10233:SF9 none none none
PANTHER 170 397 228 PTHR10233:SF9 none none none
Pfam 19 385 367 PF01008 "KEGG:00270+5.3.1.23","MetaCyc:PWY-4361","MetaCyc:PWY-7174","UniPathway:UPA00904" Initiation factor 2 subunit family IPR000649
PANTHER 3 97 95 PTHR10233 none none none
PANTHER 170 397 228 PTHR10233 none none none
SUPERFAMILY 6 95 90 SSF100950 none none none
SUPERFAMILY 170 400 231 SSF100950 none none none
Gene3D 199 404 206 G3DSA:3.40.50.10470 none none none

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting