Protein : Qrob_P0350340.2 Q. robur
Protein Identifier  ? Qrob_P0350340.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=1) K01214 - isoamylase [EC:3.2.1.68] Code Enzyme  EC:3.2.1.68
Gene Prediction Quality  validated Protein length 

Sequence

Length: 418  
Kegg Orthology  K01214
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0043169 cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v100074892m 54 417 + 364 Gaps:10 56.73 624 80.51 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s13240g 65 417 + 353 Gaps:9 43.58 794 83.53 0.0 POPTRDRAFT_1107375 isoamylase family protein
blastp_kegg lcl|pxb:103933774 55 417 + 363 Gaps:12 44.57 801 81.79 0.0 isoamylase 1 chloroplastic
blastp_kegg lcl|cit:102616774 54 417 + 364 Gaps:10 43.98 805 80.51 0.0 isoamylase 1 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa025097mg 53 417 + 365 Gaps:9 46.07 777 79.89 0.0 hypothetical protein
blastp_kegg lcl|vvi:100261768 60 417 + 358 Gaps:10 46.52 748 82.18 0.0 isoamylase 1 chloroplastic-like
blastp_kegg lcl|pmum:103323593 13 417 + 405 Gaps:15 50.19 805 72.28 0.0 isoamylase 1 chloroplastic
blastp_kegg lcl|pop:POPTR_0006s07010g 65 417 + 353 Gaps:10 39.61 876 83.00 0.0 POPTRDRAFT_560622 hypothetical protein
blastp_kegg lcl|csv:101205766 57 417 + 361 Gaps:12 44.32 810 78.83 0.0 isoamylase 1 chloroplastic-like
blastp_kegg lcl|csv:101227904 57 417 + 361 Gaps:12 44.32 810 78.83 0.0 isoamylase 1 chloroplastic-like
blastp_pdb 2vuy_B 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2vuy_A 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2vr5_B 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2vr5_A 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2vnc_B 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2vnc_A 85 417 + 333 Gaps:56 46.66 718 41.19 4e-62 mol:protein length:718 GLYCOGEN OPERON PROTEIN GLGX
blastp_pdb 2wsk_A 85 417 + 333 Gaps:33 48.10 657 36.71 3e-51 mol:protein length:657 GLYCOGEN DEBRANCHING ENZYME
blastp_pdb 1bf2_A 176 416 + 241 Gaps:45 32.80 750 38.21 1e-31 mol:protein length:750 ISOAMYLASE
blastp_pdb 2wan_A 104 417 + 314 Gaps:66 30.40 921 30.71 6e-21 mol:protein length:921 PULLULANASE
blastp_pdb 2e9b_B 100 416 + 317 Gaps:70 38.86 718 33.33 3e-19 mol:protein length:718 AmyX protein
blastp_uniprot_sprot sp|O04196|ISOA1_ARATH 69 417 + 349 Gaps:9 43.68 783 75.73 0.0 Isoamylase 1 chloroplastic OS Arabidopsis thaliana GN ISA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M0S5|ISOA3_ARATH 76 417 + 342 Gaps:28 43.98 764 46.13 2e-80 Isoamylase 3 chloroplastic OS Arabidopsis thaliana GN ISA3 PE 1 SV 2
blastp_uniprot_sprot sp|P0A4Y4|GLGX_MYCTU 82 417 + 336 Gaps:42 45.77 721 39.39 3e-55 Glycogen operon protein GlgX homolog OS Mycobacterium tuberculosis GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|P0A4Y5|GLGX_MYCBO 82 417 + 336 Gaps:42 45.77 721 39.39 3e-55 Glycogen operon protein GlgX homolog OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|Q8KR69|GLGX_ERWCH 81 416 + 336 Gaps:37 48.25 657 37.54 1e-54 Glycogen debranching enzyme OS Erwinia chrysanthemi GN glgX PE 1 SV 1
blastp_uniprot_sprot sp|A8GKU9|GLGX_SERP5 81 417 + 337 Gaps:31 48.71 661 36.34 1e-53 Glycogen debranching enzyme OS Serratia proteamaculans (strain 568) GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|B2K6G0|GLGX_YERPB 85 416 + 332 Gaps:47 47.89 662 39.43 1e-53 Glycogen debranching enzyme OS Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|A7FNX4|GLGX_YERP3 85 416 + 332 Gaps:47 47.89 662 39.75 2e-53 Glycogen debranching enzyme OS Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|A4TQV1|GLGX_YERPP 85 416 + 332 Gaps:47 47.89 662 39.43 2e-53 Glycogen debranching enzyme OS Yersinia pestis (strain Pestoides F) GN glgX PE 3 SV 1
blastp_uniprot_sprot sp|Q1CDL4|GLGX_YERPN 85 416 + 332 Gaps:47 47.89 662 39.43 2e-53 Glycogen debranching enzyme OS Yersinia pestis bv. Antiqua (strain Nepal516) GN glgX PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 89 183 95 PF02922 none Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPR004193
PANTHER 33 186 154 PTHR10357 none none IPR015902
Gene3D 85 229 145 G3DSA:2.60.40.10 none none IPR013783
SUPERFAMILY 85 224 140 SSF81296 none none IPR014756
PANTHER 203 417 215 PTHR10357 none none IPR015902
PANTHER 33 186 154 PTHR10357:SF21 none none none
Gene3D 230 417 188 G3DSA:3.20.20.80 none none IPR013781
Pfam 254 375 122 PF00128 none Alpha amylase, catalytic domain IPR006047
PANTHER 203 417 215 PTHR10357:SF21 none none none
SUPERFAMILY 213 417 205 SSF51445 none none IPR017853

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting