Protein : Qrob_P0349730.2 Q. robur
Protein Identifier  ? Qrob_P0349730.2 Organism . Name  Quercus robur
Score  64.1 Score Type  egn
Protein Description  (M=13) PTHR22595:SF34 - BASIC ENDOCHITINASE B (PTHR22595:SF34) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 334  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008646mg 5 333 + 329 Gaps:14 98.76 323 74.61 5e-166 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s14420g 3 333 + 331 Gaps:17 100.00 318 73.58 1e-163 POPTRDRAFT_721570 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s14380g 3 333 + 331 Gaps:17 100.00 318 74.53 6e-161 POPTRDRAFT_557015 Chain A family protein
blastp_kegg lcl|pop:POPTR_0004s18870g 23 333 + 311 Gaps:14 93.77 321 76.74 2e-160 POPTRDRAFT_831333 chitinase family protein
blastp_kegg lcl|tcc:TCM_006498 3 333 + 331 Gaps:18 100.00 321 71.34 3e-160 Basic chitinase
blastp_kegg lcl|mtr:MTR_3g118390 3 325 + 323 Gaps:17 95.06 324 71.75 2e-159 Endochitinase
blastp_kegg lcl|pvu:PHAVU_009G116600g 1 333 + 333 Gaps:17 97.25 327 69.50 8e-159 hypothetical protein
blastp_kegg lcl|pmum:103334901 19 333 + 315 Gaps:12 93.81 323 74.59 2e-157 endochitinase 2-like
blastp_kegg lcl|rcu:RCOM_0806420 2 333 + 332 Gaps:14 99.08 325 72.98 1e-155 class I chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|fve:101294711 1 328 + 328 Gaps:11 91.35 347 72.56 4e-154 endochitinase CH5B-like
blastp_pdb 3cql_B 85 325 + 241 Gaps:1 99.59 243 75.21 2e-134 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 85 325 + 241 Gaps:1 99.59 243 75.21 2e-134 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 24 330 + 307 Gaps:6 98.06 309 64.69 4e-130 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 24 330 + 307 Gaps:6 98.06 309 64.69 4e-130 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 24 330 + 307 Gaps:6 98.06 309 64.69 4e-130 mol:protein length:309 chitinase
blastp_pdb 1cns_B 85 324 + 240 Gaps:1 99.18 243 65.98 4e-112 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 85 324 + 240 Gaps:1 99.18 243 65.98 4e-112 mol:protein length:243 CHITINASE
blastp_pdb 2baa_A 85 324 + 240 Gaps:1 99.18 243 66.39 2e-111 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1dxj_A 84 325 + 242 Gaps:3 99.59 242 65.56 2e-110 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2z38_A 83 324 + 242 Gaps:2 98.79 247 62.70 2e-107 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 1 333 + 333 Gaps:15 96.95 328 70.13 7e-162 Endochitinase OS Phaseolus vulgaris PE 1 SV 1
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 3 333 + 331 Gaps:18 100.00 321 71.03 1e-160 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|P36361|CHI5_PHAVU 1 333 + 333 Gaps:17 97.25 327 69.50 3e-160 Endochitinase CH5B OS Phaseolus vulgaris PE 3 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 7 333 + 327 Gaps:16 98.46 324 71.79 3e-156 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 24 333 + 310 Gaps:16 100.00 302 73.18 6e-154 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|P21226|CHI2_PEA 2 325 + 324 Gaps:18 94.44 324 70.26 8e-149 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2
blastp_uniprot_sprot sp|Q09023|CHI2_BRANA 23 326 + 304 Gaps:14 91.30 322 71.09 5e-147 Endochitinase CH25 OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P24091|CHI2_TOBAC 24 333 + 310 Gaps:13 92.90 324 71.43 3e-146 Endochitinase B OS Nicotiana tabacum GN CHN50 PE 1 SV 1
blastp_uniprot_sprot sp|P08252|CHI1_TOBAC 24 333 + 310 Gaps:8 93.01 329 69.61 7e-146 Endochitinase A OS Nicotiana tabacum GN CHN48 PE 1 SV 2
blastp_uniprot_sprot sp|P51613|CHIB_VITVI 3 333 + 331 Gaps:19 100.00 314 68.79 4e-145 Basic endochitinase OS Vitis vinifera GN CHIT1B PE 2 SV 1

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 106 128 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
Gene3D 226 318 93 G3DSA:1.10.530.10 none none none
Gene3D 88 153 66 G3DSA:1.10.530.10 none none none
SUPERFAMILY 84 325 242 SSF53955 none none IPR023346
Gene3D 174 225 52 G3DSA:3.30.20.10 none none none
Phobius 5 15 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 24 62 39 G3DSA:3.30.60.10 none none IPR001002
PANTHER 1 333 333 PTHR22595 none none none
PANTHER 1 333 333 PTHR22595:SF34 none none none
PIRSF 1 325 325 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
SMART 25 62 38 SM00270 none Chitin binding domain IPR001002
Pfam 88 318 231 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
PRINTS 33 41 9 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 48 55 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 41 48 8 PR00451 none Chitin-binding domain signature IPR001002
ProDom 24 62 39 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
Pfam 23 62 40 PF00187 none Chitin recognition protein IPR001002
ProSitePatterns 231 241 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSiteProfiles 23 64 42 PS50941 none Chitin-binding type-1 domain profile. IPR001002
SUPERFAMILY 25 64 40 SSF57016 none none IPR001002
Phobius 24 333 310 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSitePatterns 35 54 20 PS00026 none Chitin recognition or binding domain signature. IPR018371

3 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_GRAM_POSITIVE 1 23 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting