Protein : Qrob_P0349720.2 Q. robur
Protein Identifier  ? Qrob_P0349720.2 Organism . Name  Quercus robur
Score  100.2 Score Type  egn
Protein Description  (M=13) PTHR22595:SF34 - BASIC ENDOCHITINASE B (PTHR22595:SF34) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 336  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008646mg 5 335 + 331 Gaps:16 98.76 323 72.41 5e-158 hypothetical protein
blastp_kegg lcl|tcc:TCM_006498 3 335 + 333 Gaps:20 100.00 321 70.72 2e-156 Basic chitinase
blastp_kegg lcl|mtr:MTR_3g118390 3 327 + 325 Gaps:19 95.06 324 70.78 7e-156 Endochitinase
blastp_kegg lcl|pop:POPTR_0009s14420g 3 335 + 333 Gaps:19 100.00 318 70.75 6e-155 POPTRDRAFT_721570 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G116600g 1 335 + 335 Gaps:17 97.25 327 67.92 1e-154 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s18870g 23 335 + 313 Gaps:16 93.77 321 74.75 3e-154 POPTRDRAFT_831333 chitinase family protein
blastp_kegg lcl|pvu:PHAVU_009G116700g 1 335 + 335 Gaps:10 97.13 349 63.42 4e-153 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s14380g 3 335 + 333 Gaps:19 100.00 318 71.38 7e-153 POPTRDRAFT_557015 Chain A family protein
blastp_kegg lcl|pmum:103334901 19 332 + 314 Gaps:14 92.88 323 73.33 4e-151 endochitinase 2-like
blastp_kegg lcl|rcu:RCOM_0806420 2 335 + 334 Gaps:16 99.08 325 71.12 6e-151 class I chitinase putative (EC:3.2.1.14)
blastp_pdb 3cql_B 87 327 + 241 Gaps:1 99.59 243 73.55 7e-130 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 87 327 + 241 Gaps:1 99.59 243 73.55 7e-130 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 24 332 + 309 Gaps:8 98.06 309 65.02 2e-129 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 24 332 + 309 Gaps:8 98.06 309 65.02 2e-129 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 24 332 + 309 Gaps:8 98.06 309 65.02 2e-129 mol:protein length:309 chitinase
blastp_pdb 1cns_B 87 327 + 241 Gaps:1 99.59 243 65.29 7e-111 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 87 327 + 241 Gaps:1 99.59 243 65.29 7e-111 mol:protein length:243 CHITINASE
blastp_pdb 2baa_A 87 326 + 240 Gaps:1 99.18 243 65.56 1e-109 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1dxj_A 86 327 + 242 Gaps:3 99.59 242 64.73 2e-108 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2z38_A 83 326 + 244 Gaps:2 99.60 247 61.79 4e-105 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 1 335 + 335 Gaps:17 96.95 328 69.18 2e-157 Endochitinase OS Phaseolus vulgaris PE 1 SV 1
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 3 335 + 333 Gaps:20 100.00 321 70.40 9e-157 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|P36361|CHI5_PHAVU 1 335 + 335 Gaps:17 97.25 327 67.92 5e-156 Endochitinase CH5B OS Phaseolus vulgaris PE 3 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 7 335 + 329 Gaps:18 98.46 324 71.47 2e-150 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 24 335 + 312 Gaps:18 100.00 302 72.52 3e-148 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|Q09023|CHI2_BRANA 23 328 + 306 Gaps:16 91.30 322 71.43 2e-145 Endochitinase CH25 OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P24091|CHI2_TOBAC 24 335 + 312 Gaps:15 92.90 324 70.10 8e-143 Endochitinase B OS Nicotiana tabacum GN CHN50 PE 1 SV 1
blastp_uniprot_sprot sp|P08252|CHI1_TOBAC 24 335 + 312 Gaps:10 93.01 329 68.63 2e-142 Endochitinase A OS Nicotiana tabacum GN CHN48 PE 1 SV 2
blastp_uniprot_sprot sp|P21226|CHI2_PEA 8 327 + 320 Gaps:21 92.28 324 72.24 4e-142 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 23 335 + 313 Gaps:18 93.48 322 68.44 2e-141 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 24 63 40 G3DSA:3.30.60.10 none none IPR001002
SUPERFAMILY 25 64 40 SSF57016 none none IPR001002
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PIRSF 1 327 327 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
SUPERFAMILY 86 327 242 SSF53955 none none IPR023346
SMART 25 62 38 SM00270 none Chitin binding domain IPR001002
ProSitePatterns 35 54 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
Pfam 23 62 40 PF00187 none Chitin recognition protein IPR001002
PANTHER 1 335 335 PTHR22595 none none none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 5 15 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 1 335 335 PTHR22595:SF34 none none none
ProSitePatterns 233 243 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
ProSiteProfiles 23 64 42 PS50941 none Chitin-binding type-1 domain profile. IPR001002
ProDom 24 62 39 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
PRINTS 33 41 9 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 41 48 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 48 55 8 PR00451 none Chitin-binding domain signature IPR001002
ProSitePatterns 108 130 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
Gene3D 177 227 51 G3DSA:3.30.20.10 none none none
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 90 320 231 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Gene3D 90 155 66 G3DSA:1.10.530.10 none none none
Gene3D 228 320 93 G3DSA:1.10.530.10 none none none
Phobius 24 335 312 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_EUK 1 23 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting