Protein : Qrob_P0349710.2 Q. robur
Protein Identifier  ? Qrob_P0349710.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=13) PTHR22595:SF34 - BASIC ENDOCHITINASE B (PTHR22595:SF34) Code Enzyme  EC:3.2.1.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 320  
Kegg Orthology  K01183
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008061 chitin binding Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0004568 chitinase activity Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.
GO:0006032 chitin catabolic process The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO:0016998 cell wall macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008646mg 3 319 + 317 Gaps:4 98.76 323 83.07 0.0 hypothetical protein
blastp_kegg lcl|pmum:103334901 17 319 + 303 Gaps:2 93.81 323 83.83 2e-180 endochitinase 2-like
blastp_kegg lcl|pop:POPTR_0004s18870g 21 319 + 299 Gaps:4 93.77 321 83.06 2e-176 POPTRDRAFT_831333 chitinase family protein
blastp_kegg lcl|tcc:TCM_006498 1 319 + 319 Gaps:6 100.00 321 75.08 2e-172 Basic chitinase
blastp_kegg lcl|mtr:MTR_3g118390 1 311 + 311 Gaps:3 95.06 324 73.70 1e-171 Endochitinase
blastp_kegg lcl|fve:101294711 1 314 + 314 Gaps:4 91.07 347 80.70 1e-170 endochitinase CH5B-like
blastp_kegg lcl|pop:POPTR_0009s14420g 1 319 + 319 Gaps:5 100.00 318 75.47 1e-170 POPTRDRAFT_721570 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G116600g 1 319 + 319 Gaps:3 96.64 327 70.57 2e-167 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0806420 1 319 + 319 Gaps:4 98.77 325 76.32 8e-167 class I chitinase putative (EC:3.2.1.14)
blastp_kegg lcl|pop:POPTR_0009s14380g 1 319 + 319 Gaps:5 100.00 318 75.79 4e-165 POPTRDRAFT_557015 Chain A family protein
blastp_pdb 3cql_B 70 311 + 242 none 99.59 243 78.51 1e-140 mol:protein length:243 Endochitinase
blastp_pdb 3cql_A 70 311 + 242 none 99.59 243 78.51 1e-140 mol:protein length:243 Endochitinase
blastp_pdb 3iwr_B 22 316 + 295 Gaps:8 98.06 309 66.34 2e-136 mol:protein length:309 Chitinase
blastp_pdb 3iwr_A 22 316 + 295 Gaps:8 98.06 309 66.34 2e-136 mol:protein length:309 Chitinase
blastp_pdb 2dkv_A 22 316 + 295 Gaps:8 98.06 309 66.34 2e-136 mol:protein length:309 chitinase
blastp_pdb 1dxj_A 69 311 + 243 Gaps:2 99.59 242 67.22 2e-117 mol:protein length:242 CLASS II CHITINASE
blastp_pdb 2baa_A 70 310 + 241 none 99.18 243 68.88 2e-116 mol:protein length:243 ENDOCHITINASE (26 KD)
blastp_pdb 1cns_B 70 310 + 241 none 99.18 243 68.46 8e-116 mol:protein length:243 CHITINASE
blastp_pdb 1cns_A 70 310 + 241 none 99.18 243 68.46 8e-116 mol:protein length:243 CHITINASE
blastp_pdb 2z38_A 68 310 + 243 Gaps:1 98.79 247 64.75 4e-114 mol:protein length:247 Chitinase
blastp_uniprot_sprot sp|Q41596|CHI1_THECC 1 319 + 319 Gaps:6 100.00 321 74.77 1e-172 Endochitinase 1 OS Theobroma cacao GN CHIA1 PE 2 SV 1
blastp_uniprot_sprot sp|P06215|CHIT_PHAVU 7 319 + 313 Gaps:3 94.51 328 72.58 4e-170 Endochitinase OS Phaseolus vulgaris PE 1 SV 1
blastp_uniprot_sprot sp|Q39799|CHI1_GOSHI 5 319 + 315 Gaps:6 98.46 324 75.24 6e-170 Endochitinase 1 OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|P36361|CHI5_PHAVU 1 319 + 319 Gaps:3 96.64 327 70.57 8e-169 Endochitinase CH5B OS Phaseolus vulgaris PE 3 SV 1
blastp_uniprot_sprot sp|Q39785|CHI2_GOSHI 22 319 + 298 Gaps:6 100.00 302 76.49 6e-168 Endochitinase 2 (Fragment) OS Gossypium hirsutum PE 2 SV 2
blastp_uniprot_sprot sp|P51613|CHIB_VITVI 1 319 + 319 Gaps:5 100.00 314 72.93 3e-158 Basic endochitinase OS Vitis vinifera GN CHIT1B PE 2 SV 1
blastp_uniprot_sprot sp|P21226|CHI2_PEA 7 311 + 305 Gaps:2 93.52 324 73.93 4e-156 Endochitinase A2 OS Pisum sativum GN CHI2 PE 1 SV 2
blastp_uniprot_sprot sp|Q09023|CHI2_BRANA 21 312 + 292 Gaps:2 91.30 322 72.79 5e-156 Endochitinase CH25 OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|Q05538|CHIC_SOLLC 21 319 + 299 Gaps:2 93.48 322 71.43 1e-155 Basic 30 kDa endochitinase OS Solanum lycopersicum GN CHI9 PE 1 SV 1
blastp_uniprot_sprot sp|P52405|CHI3_SOLTU 21 319 + 299 Gaps:2 94.65 318 72.09 2e-155 Endochitinase 3 (Fragment) OS Solanum tuberosum GN CHTB3 PE 2 SV 1

25 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 157 211 55 G3DSA:3.30.20.10 none none none
Gene3D 22 61 40 G3DSA:3.30.60.10 none none IPR001002
ProSitePatterns 91 113 23 PS00773 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 1. IPR000726
Phobius 22 319 298 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PIRSF 1 311 311 PIRSF001060 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" none IPR016283
ProDom 22 53 32 PD000609 none CHITIN-BINDING CHITINASE PRECURSOR SIGNAL GLYCOSIDASE HYDROLASE LECTIN DEGRADATION DIRECT SEQUENCING IPR001002
Phobius 14 21 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 21 319 299 PTHR22595 none none none
Phobius 3 13 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 69 311 243 SSF53955 none none IPR023346
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 23 62 40 SSF57016 none none IPR001002
Pfam 73 304 232 PF00182 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinase class I IPR000726
Pfam 21 60 40 PF00187 none Chitin recognition protein IPR001002
PRINTS 31 39 9 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 39 46 8 PR00451 none Chitin-binding domain signature IPR001002
PRINTS 46 53 8 PR00451 none Chitin-binding domain signature IPR001002
ProSitePatterns 217 227 11 PS00774 "KEGG:00520+3.2.1.14","MetaCyc:PWY-6902" Chitinases family 19 signature 2. IPR000726
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 212 304 93 G3DSA:1.10.530.10 none none none
Gene3D 73 138 66 G3DSA:1.10.530.10 none none none
ProSitePatterns 33 52 20 PS00026 none Chitin recognition or binding domain signature. IPR018371
PANTHER 21 319 299 PTHR22595:SF34 none none none
ProSiteProfiles 21 62 42 PS50941 none Chitin-binding type-1 domain profile. IPR001002
SMART 23 60 38 SM00270 none Chitin binding domain IPR001002

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 21 20
SignalP_EUK 1 21 20
SignalP_GRAM_POSITIVE 1 21 20

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting