Protein : Qrob_P0347780.2 Q. robur
Protein Identifier  ? Qrob_P0347780.2 Organism . Name  Quercus robur
Protein Description  (M=1) K02542 - minichromosome maintenance protein 6 Alias (in v1)  Qrob_P0324680.1
Code Enzyme  EC:3.6.4.12 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 817  
Kegg Orthology  K02542
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO:0006270 DNA replication initiation The process in which DNA-dependent DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action.
GO:0003678 DNA helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix.
GO:0042555 MCM complex A hexameric protein complex required for the initiation and regulation of DNA replication.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10014269mg 1 816 + 816 Gaps:26 100.00 834 84.29 0.0 hypothetical protein
blastp_kegg lcl|cit:102615859 1 816 + 816 Gaps:26 100.00 834 84.29 0.0 DNA replication licensing factor mcm6-like
blastp_kegg lcl|vvi:100260804 1 816 + 816 Gaps:6 100.00 812 84.11 0.0 MCM6 minichromosome maintenance complex component 6
blastp_kegg lcl|pop:POPTR_0001s12380g 1 816 + 816 Gaps:36 100.00 842 80.64 0.0 POPTRDRAFT_797236 hypothetical protein
blastp_kegg lcl|pmum:103325542 1 816 + 816 Gaps:38 100.00 850 79.88 0.0 DNA replication licensing factor MCM6
blastp_kegg lcl|fve:101298494 1 816 + 816 Gaps:37 100.00 821 82.70 0.0 DNA replication licensing factor MCM6-like
blastp_kegg lcl|csv:101223575 3 816 + 814 Gaps:33 99.52 839 80.12 0.0 MCM6 minichromosome maintenance complex component 6
blastp_kegg lcl|csv:101219775 3 816 + 814 Gaps:33 99.52 839 80.12 0.0 MCM6 minichromosome maintenance complex component 6
blastp_kegg lcl|cmo:103484229 1 816 + 816 Gaps:31 100.00 839 79.74 0.0 DNA replication licensing factor MCM6
blastp_kegg lcl|sot:102596741 5 816 + 812 Gaps:26 99.28 834 80.43 0.0 DNA replication licensing factor MCM6-like
blastp_pdb 3f9v_A 19 638 + 620 Gaps:76 95.46 595 40.32 2e-120 mol:protein length:595 Minichromosome maintenance protein MCM
blastp_pdb 2vl6_C 9 250 + 242 Gaps:22 89.55 268 29.17 2e-27 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_B 9 250 + 242 Gaps:22 89.55 268 29.17 2e-27 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 2vl6_A 9 250 + 242 Gaps:22 89.55 268 29.17 2e-27 mol:protein length:268 MINICHROMOSOME MAINTENANCE PROTEIN MCM
blastp_pdb 1ltl_F 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_E 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_D 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_C 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_B 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_pdb 1ltl_A 104 250 + 147 Gaps:3 51.61 279 34.72 2e-19 mol:protein length:279 DNA replication initiator (Cdc21/Cdc54)
blastp_uniprot_sprot sp|P49731|MCM6_SCHPO 9 634 + 626 Gaps:29 72.98 892 51.15 0.0 DNA replication licensing factor mcm6 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN mcm6 PE 1 SV 2
blastp_uniprot_sprot sp|Q28CM3|MCM6M_XENTR 2 816 + 815 Gaps:57 98.42 821 43.81 0.0 Maternal DNA replication licensing factor mcm6 OS Xenopus tropicalis GN mmcm6 PE 2 SV 1
blastp_uniprot_sprot sp|Q2KIZ8|MCM6_BOVIN 10 816 + 807 Gaps:44 97.56 821 44.69 0.0 DNA replication licensing factor MCM6 OS Bos taurus GN MCM6 PE 2 SV 1
blastp_uniprot_sprot sp|P97311|MCM6_MOUSE 10 816 + 807 Gaps:56 97.56 821 44.32 0.0 DNA replication licensing factor MCM6 OS Mus musculus GN Mcm6 PE 1 SV 1
blastp_uniprot_sprot sp|Q14566|MCM6_HUMAN 10 816 + 807 Gaps:56 97.56 821 43.95 0.0 DNA replication licensing factor MCM6 OS Homo sapiens GN MCM6 PE 1 SV 1
blastp_uniprot_sprot sp|Q5FWY4|MCM6M_XENLA 8 816 + 809 Gaps:54 97.56 821 44.07 0.0 Maternal DNA replication licensing factor mcm6 OS Xenopus laevis GN mmcm6 PE 1 SV 1
blastp_uniprot_sprot sp|Q7Q0Q1|MCM6_ANOGA 10 816 + 807 Gaps:46 98.16 814 44.43 0.0 DNA replication licensing factor Mcm6 OS Anopheles gambiae GN Mcm6 PE 3 SV 3
blastp_uniprot_sprot sp|Q7ZY18|MC6ZB_XENLA 3 816 + 814 Gaps:64 98.42 825 44.33 0.0 Zygotic DNA replication licensing factor mcm6-B OS Xenopus laevis GN zmcm6-b PE 1 SV 1
blastp_uniprot_sprot sp|Q498J7|MC6ZA_XENLA 3 816 + 814 Gaps:58 98.42 823 43.33 0.0 Zygotic DNA replication licensing factor mcm6-A OS Xenopus laevis GN zmcm6-a PE 1 SV 1
blastp_uniprot_sprot sp|Q86B14|MCM6_DICDI 37 816 + 780 Gaps:76 89.97 867 45.00 0.0 DNA replication licensing factor mcm6 OS Dictyostelium discoideum GN mcm6 PE 3 SV 1

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 199 249 51 G3DSA:2.40.50.140 none none IPR012340
Gene3D 119 146 28 G3DSA:2.40.50.140 none none IPR012340
Gene3D 15 115 101 G3DSA:3.30.1640.10 none none none
Pfam 333 644 312 PF00493 none MCM2/3/5 family IPR001208
PANTHER 7 258 252 PTHR11630 none none none
Coils 755 776 22 Coil none none none
ProSitePatterns 454 462 9 PS00847 "Reactome:REACT_152","Reactome:REACT_1538","Reactome:REACT_383" MCM family signature. IPR018525
SUPERFAMILY 20 250 231 SSF50249 none none IPR012340
Pfam 19 136 118 PF14551 none MCM N-terminal domain IPR027925
SUPERFAMILY 355 651 297 SSF52540 none none IPR027417
PANTHER 277 657 381 PTHR11630 none none none
Gene3D 355 534 180 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 345 551 207 PS50051 none MCM family domain profile. IPR001208
PANTHER 7 258 252 PTHR11630:SF43 none none IPR008049
PANTHER 277 657 381 PTHR11630:SF43 none none IPR008049
PRINTS 386 401 16 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 498 510 13 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 525 533 9 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 446 460 15 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PRINTS 474 487 14 PR01657 none Mini-chromosome maintenance (MCM) protein family signature IPR001208
PANTHER 678 816 139 PTHR11630:SF43 none none IPR008049
SMART 116 652 537 SM00350 none minichromosome maintenance proteins IPR001208
PRINTS 167 184 18 PR01662 none Mini-chromosome maintenance (MCM) protein 6 signature IPR008049
PRINTS 279 300 22 PR01662 none Mini-chromosome maintenance (MCM) protein 6 signature IPR008049
PRINTS 117 129 13 PR01662 none Mini-chromosome maintenance (MCM) protein 6 signature IPR008049
PRINTS 220 231 12 PR01662 none Mini-chromosome maintenance (MCM) protein 6 signature IPR008049
PRINTS 75 87 13 PR01662 none Mini-chromosome maintenance (MCM) protein 6 signature IPR008049
PANTHER 678 816 139 PTHR11630 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting