Protein : Qrob_P0343650.2 Q. robur
Protein Identifier  ? Qrob_P0343650.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) 4.1.2.27 - Sphinganine-1-phosphate aldolase. Code Enzyme  EC:4.1.2.27
Gene Prediction Quality  validated Protein length 

Sequence

Length: 669  
Kegg Orthology  K01634
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103322098 1 667 + 667 Gaps:8 99.81 540 86.83 0.0 sphingosine-1-phosphate lyase
blastp_kegg lcl|pper:PRUPE_ppa003923mg 1 668 + 668 Gaps:8 100.00 540 86.67 0.0 hypothetical protein
blastp_kegg lcl|mdm:103452172 1 668 + 668 none 100.00 541 85.77 0.0 sphingosine-1-phosphate lyase
blastp_kegg lcl|pxb:103935108 1 668 + 668 Gaps:7 100.00 541 85.58 0.0 sphingosine-1-phosphate lyase
blastp_kegg lcl|fve:101291202 1 668 + 668 Gaps:7 100.00 541 83.36 0.0 sphingosine-1-phosphate lyase-like
blastp_kegg lcl|cam:101496501 1 667 + 667 Gaps:7 99.82 541 83.15 0.0 sphingosine-1-phosphate lyase-like
blastp_kegg lcl|mtr:MTR_7g022310 1 668 + 668 none 100.00 541 83.55 0.0 Sphingosine-1-phosphate lyase
blastp_kegg lcl|rcu:RCOM_1079290 1 668 + 668 none 100.00 541 82.44 0.0 sphingosine phosphate lyase putative (EC:4.1.2.27)
blastp_kegg lcl|cmo:103498855 1 668 + 668 Gaps:1 100.00 540 81.48 0.0 sphingosine-1-phosphate lyase
blastp_kegg lcl|csv:101217975 1 668 + 668 Gaps:1 100.00 540 81.30 0.0 sphingosine-1-phosphate lyase-like
blastp_pdb 3mbb_B 72 665 + 594 Gaps:23 91.25 514 47.33 6e-141 mol:protein length:514 Putative sphingosine-1-phosphate lyase
blastp_pdb 3mbb_A 72 665 + 594 Gaps:23 91.25 514 47.33 6e-141 mol:protein length:514 Putative sphingosine-1-phosphate lyase
blastp_pdb 3mad_B 72 665 + 594 Gaps:23 91.25 514 47.33 6e-141 mol:protein length:514 Sphingosine-1-phosphate lyase
blastp_pdb 3mad_A 72 665 + 594 Gaps:23 91.25 514 47.33 6e-141 mol:protein length:514 Sphingosine-1-phosphate lyase
blastp_pdb 3maf_A 72 665 + 594 Gaps:23 90.54 518 47.33 7e-141 mol:protein length:518 sphingosine-1-phosphate lyase
blastp_pdb 3maf_B 72 665 + 594 Gaps:23 90.54 518 47.33 7e-141 mol:protein length:518 sphingosine-1-phosphate lyase
blastp_pdb 3mau_D 72 665 + 594 Gaps:23 91.25 514 47.12 3e-140 mol:protein length:514 sphingosine-1-phosphate lyase
blastp_pdb 3mau_C 72 665 + 594 Gaps:23 91.25 514 47.12 3e-140 mol:protein length:514 sphingosine-1-phosphate lyase
blastp_pdb 3mau_B 72 665 + 594 Gaps:23 91.25 514 47.12 3e-140 mol:protein length:514 sphingosine-1-phosphate lyase
blastp_pdb 3mau_A 72 665 + 594 Gaps:23 91.25 514 47.12 3e-140 mol:protein length:514 sphingosine-1-phosphate lyase
blastp_uniprot_sprot sp|Q9C509|SGPL_ARATH 1 665 + 665 Gaps:3 99.45 544 78.37 0.0 Sphingosine-1-phosphate lyase OS Arabidopsis thaliana GN At1g27980 PE 2 SV 1
blastp_uniprot_sprot sp|Q52RG7|SGPL_ORYSJ 9 668 + 660 none 98.89 539 74.48 0.0 Sphingosine-1-phosphate lyase OS Oryza sativa subsp. japonica GN SPL PE 2 SV 2
blastp_uniprot_sprot sp|Q8CHN6|SGPL1_RAT 6 665 + 660 Gaps:20 93.13 568 42.16 2e-131 Sphingosine-1-phosphate lyase 1 OS Rattus norvegicus GN Sgpl1 PE 2 SV 1
blastp_uniprot_sprot sp|Q54RV9|SGPL_DICDI 17 665 + 649 Gaps:22 96.97 528 43.95 1e-130 Sphingosine-1-phosphate lyase OS Dictyostelium discoideum GN sglA PE 2 SV 1
blastp_uniprot_sprot sp|Q8R0X7|SGPL1_MOUSE 6 665 + 660 Gaps:28 93.13 568 42.53 3e-130 Sphingosine-1-phosphate lyase 1 OS Mus musculus GN Sgpl1 PE 2 SV 1
blastp_uniprot_sprot sp|O95470|SGPL1_HUMAN 103 665 + 563 Gaps:16 76.06 568 47.69 6e-126 Sphingosine-1-phosphate lyase 1 OS Homo sapiens GN SGPL1 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R4G0|SGPL1_PONAB 103 665 + 563 Gaps:16 76.06 568 47.45 2e-124 Sphingosine-1-phosphate lyase 1 OS Pongo abelii GN SGPL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9V7Y2|SGPL_DROME 63 659 + 597 Gaps:20 86.24 545 42.98 2e-124 Sphingosine-1-phosphate lyase OS Drosophila melanogaster GN Sply PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y194|SGPL_CAEEL 18 667 + 650 Gaps:30 94.38 552 36.85 1e-101 Sphingosine-1-phosphate lyase OS Caenorhabditis elegans GN spl-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q05567|SGPL_YEAST 102 666 + 565 Gaps:21 74.70 589 43.64 3e-101 Sphingosine-1-phosphate lyase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN DPL1 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 26 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 146 399 254 G3DSA:3.40.640.10 none none IPR015421
PANTHER 563 665 103 PTHR11999 none none none
SUPERFAMILY 99 500 402 SSF53383 none none IPR015424
Pfam 168 446 279 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
SUPERFAMILY 492 631 140 SSF53383 none none IPR015424
PANTHER 1 434 434 PTHR11999 none none none
Phobius 57 77 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 51 56 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 563 665 103 PTHR11999:SF63 none none none
PANTHER 1 434 434 PTHR11999:SF63 none none none
Phobius 27 50 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 78 668 591 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 57 79 22
TMHMM 28 50 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting