Protein : Qrob_P0336940.2 Q. robur
Protein Identifier  ? Qrob_P0336940.2 Organism . Name  Quercus robur
Score  49.3 Score Type  egn
Protein Description  (M=3) PTHR24423//PTHR24423:SF415 - TWO-COMPONENT SENSOR HISTIDINE KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.13.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1144  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0016310 phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
GO:0016772 transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO:0004871 signal transducer activity Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO:0000155 phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s11670g 6 1143 + 1138 Gaps:57 97.79 1130 56.74 0.0 POPTRDRAFT_898811 casein kinase i family protein
blastp_kegg lcl|tcc:TCM_004796 16 1143 + 1128 Gaps:32 97.10 1137 53.35 0.0 Hybrid signal transduction histidine kinase E putative
blastp_kegg lcl|pop:POPTR_0008s19540g 17 1143 + 1127 Gaps:53 96.83 1136 55.64 0.0 POPTRDRAFT_872753 casein kinase i family protein
blastp_kegg lcl|cic:CICLE_v10023268mg 1 1143 + 1143 Gaps:119 99.55 1117 54.86 0.0 hypothetical protein
blastp_kegg lcl|vvi:100241920 10 1143 + 1134 Gaps:69 97.75 1110 54.65 0.0 histidine kinase CKI1-like
blastp_kegg lcl|cmo:103494157 81 1143 + 1063 Gaps:38 99.72 1064 55.33 0.0 histidine kinase CKI1-like
blastp_kegg lcl|gmx:100790376 20 1143 + 1124 Gaps:79 99.91 1056 54.60 0.0 histidine kinase CKI1-like
blastp_kegg lcl|rcu:RCOM_1347240 10 1137 + 1128 Gaps:47 97.28 1138 52.21 0.0 histidine kinase 1 plant putative (EC:2.7.13.3)
blastp_kegg lcl|cam:101504256 3 1141 + 1139 Gaps:70 98.45 1100 53.19 0.0 histidine kinase CKI1-like
blastp_kegg lcl|csv:101219099 104 1143 + 1040 Gaps:38 100.00 1038 54.05 0.0 histidine kinase CKI1-like
blastp_pdb 3mmn_A 986 1143 + 158 Gaps:7 75.24 206 49.68 4e-38 mol:protein length:206 Histidine kinase homolog
blastp_pdb 3mm4_A 986 1143 + 158 Gaps:7 75.24 206 49.68 4e-38 mol:protein length:206 Histidine kinase homolog
blastp_pdb 2ayx_A 983 1128 + 146 Gaps:26 47.24 254 37.50 1e-10 mol:protein length:254 Sensor kinase protein rcsC
blastp_pdb 3gl9_D 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3gl9_C 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3gl9_B 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3gl9_A 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3dgf_C 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3dge_D 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_pdb 3dge_C 1009 1140 + 132 Gaps:15 95.90 122 34.19 5e-10 mol:protein length:122 Response regulator
blastp_uniprot_sprot sp|O22267|CKI1_ARATH 3 1143 + 1141 Gaps:89 98.04 1122 43.82 0.0 Histidine kinase CKI1 OS Arabidopsis thaliana GN CKI1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SXL4|AHK1_ARATH 122 1137 + 1016 Gaps:206 80.70 1207 29.67 2e-73 Histidine kinase 1 OS Arabidopsis thaliana GN AHK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C5U1|AHK3_ARATH 317 1142 + 826 Gaps:65 47.10 1036 30.94 3e-30 Histidine kinase 3 OS Arabidopsis thaliana GN AHK3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5U0|AHK4_ARATH 351 1137 + 787 Gaps:58 42.04 1080 32.60 3e-29 Histidine kinase 4 OS Arabidopsis thaliana GN AHK4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5U2|AHK2_ARATH 334 1137 + 804 Gaps:82 41.16 1176 29.55 6e-26 Histidine kinase 2 OS Arabidopsis thaliana GN AHK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q54YZ9|DHKJ_DICDI 363 1133 + 771 Gaps:59 17.65 2062 38.46 4e-24 Hybrid signal transduction histidine kinase J OS Dictyostelium discoideum GN dhkJ PE 3 SV 2
blastp_uniprot_sprot sp|Q87GU5|LUXQ_VIBPA 374 661 + 288 Gaps:48 28.44 858 35.66 5e-24 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN luxQ PE 3 SV 1
blastp_uniprot_sprot sp|P54302|LUXQ_VIBHA 374 661 + 288 Gaps:54 28.41 859 35.66 2e-23 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio harveyi GN luxQ PE 1 SV 1
blastp_uniprot_sprot sp|Q8D5Z6|LUXQ_VIBVU 374 653 + 280 Gaps:58 27.54 857 36.86 8e-23 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio vulnificus (strain CMCP6) GN luxQ PE 3 SV 1
blastp_uniprot_sprot sp|Q7MD16|LUXQ_VIBVY 374 653 + 280 Gaps:58 27.54 857 36.44 2e-22 Autoinducer 2 sensor kinase/phosphatase LuxQ OS Vibrio vulnificus (strain YJ016) GN luxQ PE 3 SV 1

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1010 1141 132 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
PRINTS 581 595 15 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PRINTS 599 609 11 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
PRINTS 615 633 19 PR00344 none Bacterial sensor protein C-terminal signature IPR004358
Pfam 1011 1138 128 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
Gene3D 450 532 83 G3DSA:3.30.565.10 none none IPR003594
Gene3D 578 653 76 G3DSA:3.30.565.10 none none IPR003594
Gene3D 376 446 71 G3DSA:1.10.287.130 none none IPR003661
SMART 384 450 67 SM00388 none His Kinase A (phosphoacceptor) domain IPR003661
Gene3D 1007 1140 134 G3DSA:3.40.50.2300 none none none
SUPERFAMILY 372 452 81 SSF47384 none none IPR009082
Phobius 356 1143 788 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 319 329 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 1009 1137 129 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
Pfam 500 654 155 PF02518 none Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594
PANTHER 370 534 165 PTHR24423:SF415 none none none
PANTHER 876 1109 234 PTHR24423:SF415 none none none
PANTHER 576 670 95 PTHR24423:SF415 none none none
PANTHER 370 534 165 PTHR24423 none none none
PANTHER 576 670 95 PTHR24423 none none none
Pfam 387 450 64 PF00512 none His Kinase A (phospho-acceptor) domain IPR003661
SUPERFAMILY 580 652 73 SSF55874 none none IPR003594
SUPERFAMILY 439 534 96 SSF55874 none none IPR003594
SMART 500 657 158 SM00387 none Histidine kinase-like ATPases IPR003594
Phobius 330 355 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 391 657 267 PS50109 "Reactome:REACT_1046" Histidine kinase domain profile. IPR005467
Phobius 1 295 295 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 296 318 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 876 1109 234 PTHR24423 none none none
SUPERFAMILY 1007 1140 134 SSF52172 none none IPR011006

3 Localization

Analysis Start End Length
TMHMM 306 325 19
SignalP_EUK 1 19 18
TMHMM 332 354 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting