Protein : Qrob_P0329170.2 Q. robur
Protein Identifier  ? Qrob_P0329170.2 Organism . Name  Quercus robur
Score  15.3 Score Type  egn
Protein Description  (M=34) K15032 - mTERF domain-containing protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 387  
Kegg Orthology  K15032
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003690 double-stranded DNA binding Interacting selectively and non-covalently with double-stranded DNA.
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100256384 1 386 + 386 Gaps:2 97.98 396 47.94 1e-122 uncharacterized LOC100256384
blastp_kegg lcl|vvi:100252802 1 386 + 386 Gaps:8 96.24 399 51.04 2e-121 uncharacterized LOC100252802
blastp_kegg lcl|vvi:100240766 1 385 + 385 Gaps:5 98.96 384 50.26 4e-121 uncharacterized LOC100240766
blastp_kegg lcl|vvi:100245862 1 379 + 379 Gaps:5 92.80 403 50.27 6e-118 uncharacterized LOC100245862
blastp_kegg lcl|vvi:100257952 5 383 + 379 Gaps:4 97.94 389 48.29 1e-116 uncharacterized LOC100257952
blastp_kegg lcl|vvi:100251002 48 386 + 339 none 85.39 397 51.03 1e-116 uncharacterized LOC100251002
blastp_kegg lcl|tcc:TCM_021170 15 383 + 369 Gaps:10 73.92 510 48.28 1e-114 Mitochondrial transcription termination factor family protein putative
blastp_kegg lcl|tcc:TCM_021173 1 379 + 379 Gaps:4 95.95 395 47.49 1e-113 Mitochondrial transcription termination factor family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_046783 1 385 + 385 Gaps:14 95.69 394 48.28 1e-112 Mitochondrial transcription termination factor family protein putative
blastp_kegg lcl|tcc:TCM_021172 15 379 + 365 Gaps:9 96.62 385 47.85 7e-112 Mitochondrial transcription termination factor family protein putative isoform 1
rpsblast_cdd gnl|CDD|202273 84 344 + 261 Gaps:8 94.49 345 33.44 4e-23 pfam02536 mTERF mTERF. This family contains one sequence of known function Human mitochondrial transcription termination factor (mTERF) the rest of the family consists of hypothetical proteins none of which have any functional information. mTERF is a multizipper protein possessing three putative leucine zippers one of which is bipartite. The protein binds DNA as a monomer. The leucine zippers are not implicated in a dimerisation role as in other leucine zippers.
rpsblast_kog gnl|CDD|36481 1 341 + 341 Gaps:25 99.52 413 27.25 2e-31 KOG1267 KOG1267 KOG1267 Mitochondrial transcription termination factor mTERF [Transcription General function prediction only].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 241 271 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 207 237 31 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 308 342 35 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 276 307 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 135 166 32 SM00733 none Mitochondrial termination factor repeats IPR003690
SMART 99 130 32 SM00733 none Mitochondrial termination factor repeats IPR003690
PANTHER 47 384 338 PTHR13068:SF15 none none none
PANTHER 47 384 338 PTHR13068 none none none
Pfam 87 269 183 PF02536 none mTERF IPR003690
Pfam 254 361 108 PF02536 none mTERF IPR003690

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting