Protein : Qrob_P0328050.2 Q. robur
Protein Identifier  ? Qrob_P0328050.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) 4.3.1.24 - Phenylalanine ammonia-lyase. Code Enzyme  EC:4.3.1.24
Gene Prediction Quality  validated Protein length 

Sequence

Length: 129  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016841 ammonia-lyase activity Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101232568 14 128 + 115 Gaps:1 80.56 144 80.17 1e-58 phenylalanine ammonia-lyase-like
blastp_kegg lcl|csv:101218617 14 128 + 115 Gaps:1 16.27 713 85.34 3e-58 phenylalanine ammonia-lyase-like
blastp_kegg lcl|pper:PRUPE_ppa002099mg 6 128 + 123 none 17.15 717 78.86 5e-58 hypothetical protein
blastp_kegg lcl|cmo:103491175 11 128 + 118 Gaps:1 16.81 708 82.35 1e-57 phenylalanine ammonia-lyase
blastp_kegg lcl|cmo:103491171 16 128 + 113 none 16.03 705 84.96 1e-57 phenylalanine ammonia-lyase-like
blastp_kegg lcl|csv:101218144 5 128 + 124 Gaps:3 17.84 712 75.59 2e-57 phenylalanine ammonia-lyase-like
blastp_kegg lcl|vvi:100853659 3 128 + 126 Gaps:1 26.54 471 76.80 3e-57 phenylalanine ammonia-lyase-like
blastp_kegg lcl|csv:101218382 11 128 + 118 Gaps:1 16.76 710 82.35 4e-57 phenylalanine ammonia-lyase-like
blastp_kegg lcl|vvi:100252889 3 128 + 126 Gaps:1 17.61 710 78.40 6e-57 phenylalanine ammonia-lyase-like
blastp_kegg lcl|csv:101218856 16 128 + 113 none 16.03 705 84.07 6e-57 phenylalanine ammonia-lyase-like
blastp_pdb 1w27_B 3 128 + 126 Gaps:2 17.88 716 71.88 4e-54 mol:protein length:716 PHENYLALANINE AMMONIA-LYASE 1
blastp_pdb 1w27_A 3 128 + 126 Gaps:2 17.88 716 71.88 4e-54 mol:protein length:716 PHENYLALANINE AMMONIA-LYASE 1
blastp_pdb 3nz4_B 24 128 + 105 Gaps:6 15.04 698 44.76 1e-13 mol:protein length:698 Phenylalanine ammonia-lyase
blastp_pdb 3nz4_A 24 128 + 105 Gaps:6 15.04 698 44.76 1e-13 mol:protein length:698 Phenylalanine ammonia-lyase
blastp_pdb 2yii_D 24 128 + 105 Gaps:6 14.85 707 43.81 6e-13 mol:protein length:707 PHENYLALANINE AMMONIA-LYASE
blastp_pdb 2yii_C 24 128 + 105 Gaps:6 14.85 707 43.81 6e-13 mol:protein length:707 PHENYLALANINE AMMONIA-LYASE
blastp_pdb 2yii_B 24 128 + 105 Gaps:6 14.85 707 43.81 6e-13 mol:protein length:707 PHENYLALANINE AMMONIA-LYASE
blastp_pdb 2yii_A 24 128 + 105 Gaps:6 14.85 707 43.81 6e-13 mol:protein length:707 PHENYLALANINE AMMONIA-LYASE
blastp_pdb 3czo_D 50 127 + 78 Gaps:2 14.84 539 35.00 2e-07 mol:protein length:539 Histidine ammonia-lyase
blastp_pdb 3czo_C 50 127 + 78 Gaps:2 14.84 539 35.00 2e-07 mol:protein length:539 Histidine ammonia-lyase
blastp_uniprot_sprot sp|O64963|PAL1_PRUAV 6 128 + 123 none 17.15 717 78.86 1e-58 Phenylalanine ammonia-lyase 1 OS Prunus avium GN PAL1 PE 2 SV 1
blastp_uniprot_sprot sp|O23865|PAL1_DAUCA 13 128 + 116 Gaps:2 16.10 708 81.58 2e-56 Phenylalanine ammonia-lyase 1 OS Daucus carota GN PAL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q01861|PAL1_PEA 17 128 + 112 none 15.49 723 82.14 6e-56 Phenylalanine ammonia-lyase 1 OS Pisum sativum GN PAL1 PE 2 SV 1
blastp_uniprot_sprot sp|P14166|PAL1_IPOBA 9 128 + 120 Gaps:3 17.40 707 74.80 3e-55 Phenylalanine ammonia-lyase OS Ipomoea batatas GN PAL PE 2 SV 1
blastp_uniprot_sprot sp|O23924|PALY_DIGLA 13 128 + 116 Gaps:1 16.41 713 78.63 6e-55 Phenylalanine ammonia-lyase OS Digitalis lanata PE 2 SV 1
blastp_uniprot_sprot sp|P45734|PALY_TRISU 6 128 + 123 Gaps:12 18.34 725 70.68 7e-55 Phenylalanine ammonia-lyase OS Trifolium subterraneum GN PAL1 PE 3 SV 1
blastp_uniprot_sprot sp|P45726|PALY_CAMSI 12 128 + 117 Gaps:1 16.25 714 79.31 8e-55 Phenylalanine ammonia-lyase OS Camellia sinensis GN PAL PE 2 SV 1
blastp_uniprot_sprot sp|P45730|PALY_POPTR 14 128 + 115 Gaps:2 16.36 715 77.78 1e-54 Phenylalanine ammonia-lyase OS Populus trichocarpa GN PAL PE 2 SV 1
blastp_uniprot_sprot sp|O04058|PALY_HELAN 2 128 + 127 Gaps:5 18.89 667 75.40 2e-54 Phenylalanine ammonia-lyase OS Helianthus annuus GN PAL PE 2 SV 2
blastp_uniprot_sprot sp|Q42667|PALY_CITLI 6 128 + 123 none 17.04 722 72.36 3e-54 Phenylalanine ammonia-lyase OS Citrus limon GN PAL6 PE 2 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 17 128 112 PTHR10362 none none none
Gene3D 18 128 111 G3DSA:1.10.275.10 none none IPR024083
SUPERFAMILY 19 128 110 SSF48557 none none IPR008948
PANTHER 17 128 112 PTHR10362:SF7 none none none
Pfam 50 128 79 PF00221 none Aromatic amino acid lyase IPR001106

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting