Protein : Qrob_P0326460.2 Q. robur
Protein Identifier  ? Qrob_P0326460.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=3) K00281 - glycine dehydrogenase [EC:1.4.4.2] Code Enzyme  EC:1.4.4.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 433  
Kegg Orthology  K00281
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006546 glycine catabolic process The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.
GO:0004375 glycine dehydrogenase (decarboxylating) activity Catalysis of the reaction: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103320553 3 432 + 430 none 40.80 1054 93.72 0.0 glycine dehydrogenase (decarboxylating) mitochondrial
blastp_kegg lcl|mdm:103455829 3 432 + 430 Gaps:2 40.80 1049 94.16 0.0 glycine dehydrogenase (decarboxylating) mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa000675mg 3 432 + 430 none 41.39 1039 93.72 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0797460 2 432 + 431 none 40.78 1057 93.27 0.0 glycine dehydrogenase putative (EC:1.3.1.74)
blastp_kegg lcl|tcc:TCM_037284 2 432 + 431 none 41.05 1050 92.81 0.0 Glycine decarboxylase P-protein 1
blastp_kegg lcl|pop:POPTR_0006s24570g 2 432 + 431 none 40.66 1060 93.27 0.0 POPTRDRAFT_832093 P-protein subunit of glycine decarboxylase enzyme complex
blastp_kegg lcl|vvi:100266170 2 432 + 431 Gaps:1 41.23 1043 93.95 0.0 glycine dehydrogenase [decarboxylating] mitochondrial-like
blastp_kegg lcl|pxb:103952059 3 432 + 430 Gaps:2 40.80 1049 93.46 0.0 glycine dehydrogenase (decarboxylating) mitochondrial (EC:1.4.4.2)
blastp_kegg lcl|gmx:100777528 2 432 + 431 none 40.81 1056 92.11 0.0 glycine dehydrogenase [decarboxylating] mitochondrial-like
blastp_kegg lcl|gmx:100819714 2 432 + 431 none 40.70 1059 92.34 0.0 glycine dehydrogenase [decarboxylating] mitochondrial-like
blastp_pdb 1wyv_H 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyv_F 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyv_D 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyv_B 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyu_H 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyu_F 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyu_D 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyu_B 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyt_D 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_pdb 1wyt_B 2 339 + 338 Gaps:20 70.04 474 42.47 1e-63 mol:protein length:474 glycine dehydrogenase subunit 2 (P-protein)
blastp_uniprot_sprot sp|P26969|GCSP_PEA 2 432 + 431 none 40.78 1057 90.95 0.0 Glycine dehydrogenase (decarboxylating) mitochondrial OS Pisum sativum GN GDCSP PE 1 SV 1
blastp_uniprot_sprot sp|O49954|GCSP_SOLTU 3 429 + 427 none 41.26 1035 90.63 0.0 Glycine dehydrogenase (decarboxylating) mitochondrial OS Solanum tuberosum GN GDCSP PE 2 SV 1
blastp_uniprot_sprot sp|O80988|GCSP2_ARATH 2 430 + 429 Gaps:3 40.80 1044 90.38 0.0 Glycine dehydrogenase (decarboxylating) 2 mitochondrial OS Arabidopsis thaliana GN GLDP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q94B78|GCSP1_ARATH 2 430 + 429 Gaps:4 40.98 1037 90.12 0.0 Glycine dehydrogenase (decarboxylating) 1 mitochondrial OS Arabidopsis thaliana GN GLDP1 PE 1 SV 2
blastp_uniprot_sprot sp|P49362|GCSPB_FLAPR 2 432 + 431 Gaps:1 41.59 1034 88.60 0.0 Glycine dehydrogenase (decarboxylating) B mitochondrial OS Flaveria pringlei GN GDCSPB PE 3 SV 1
blastp_uniprot_sprot sp|O49850|GCSP_FLAAN 2 432 + 431 Gaps:1 41.59 1034 88.60 0.0 Glycine dehydrogenase (decarboxylating) mitochondrial OS Flaveria anomala GN GDCSP PE 3 SV 1
blastp_uniprot_sprot sp|P49361|GCSPA_FLAPR 2 432 + 431 Gaps:1 41.47 1037 88.37 0.0 Glycine dehydrogenase (decarboxylating) A mitochondrial OS Flaveria pringlei GN GDCSPA PE 2 SV 1
blastp_uniprot_sprot sp|O49852|GCSP_FLATR 2 432 + 431 Gaps:1 41.59 1034 88.14 0.0 Glycine dehydrogenase (decarboxylating) mitochondrial OS Flaveria trinervia GN GDCSPA PE 3 SV 1
blastp_uniprot_sprot sp|B2J427|GCSP_NOSP7 2 419 + 418 Gaps:3 42.39 979 66.51 0.0 Glycine dehydrogenase (decarboxylating) OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN gcvP PE 3 SV 1
blastp_uniprot_sprot sp|Q3M9G1|GCSP_ANAVT 2 419 + 418 Gaps:5 42.40 974 66.83 0.0 Glycine dehydrogenase (decarboxylating) OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN gcvP PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 396 417 22 SSF53383 none none IPR015424
SUPERFAMILY 3 353 351 SSF53383 none none IPR015424
Pfam 88 194 107 PF02347 "KEGG:00260+1.4.4.2" Glycine cleavage system P-protein IPR020580
PANTHER 3 432 430 PTHR11773 "KEGG:00260+1.4.4.2";signature_desc=GLYCINE DEHYDROGENASE none IPR020581
Gene3D 2 204 203 G3DSA:3.40.640.10 none none IPR015421
Coils 88 109 22 Coil none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting