Protein : Qrob_P0326330.2 Q. robur
Protein Identifier  ? Qrob_P0326330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K09285 - AP2-like factor, ANT lineage Gene Prediction Quality  validated
Protein length 

Sequence

Length: 417  
Kegg Orthology  K09285
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101502947 1 406 + 406 Gaps:17 96.16 417 78.05 0.0 AP2-like ethylene-responsive transcription factor At2g41710-like
blastp_kegg lcl|gmx:100786651 1 406 + 406 Gaps:16 96.17 418 77.61 0.0 AP2-like ethylene-responsive transcription factor At2g41710-like
blastp_kegg lcl|pper:PRUPE_ppa006202mg 1 406 + 406 Gaps:10 96.21 422 80.54 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_001G131300g 1 406 + 406 Gaps:19 96.16 417 77.81 0.0 hypothetical protein
blastp_kegg lcl|vvi:100248718 1 406 + 406 Gaps:8 96.04 429 80.10 0.0 AP2-like ethylene-responsive transcription factor At2g41710-like
blastp_kegg lcl|cic:CICLE_v10005012mg 1 406 + 406 Gaps:8 96.04 429 75.24 0.0 hypothetical protein
blastp_kegg lcl|cit:102624476 1 406 + 406 Gaps:8 96.04 429 75.00 0.0 AP2-like ethylene-responsive transcription factor At2g41710-like
blastp_kegg lcl|fve:101308400 1 397 + 397 Gaps:9 95.73 422 77.97 0.0 AP2-like ethylene-responsive transcription factor At2g41710-like
blastp_kegg lcl|pxb:103953198 1 406 + 406 Gaps:12 96.24 426 78.78 0.0 AP2-like ethylene-responsive transcription factor At2g41710
blastp_kegg lcl|pmum:103343812 1 406 + 406 Gaps:18 96.28 430 78.74 0.0 AP2-like ethylene-responsive transcription factor At2g41710
blastp_uniprot_sprot sp|Q8GWK2|AP2L4_ARATH 29 406 + 378 Gaps:29 89.49 428 65.54 6e-152 AP2-like ethylene-responsive transcription factor At2g41710 OS Arabidopsis thaliana GN At2g41710 PE 2 SV 2
blastp_uniprot_sprot sp|Q6X5Y6|WRI1_ARATH 64 200 + 137 Gaps:9 33.95 430 65.07 3e-55 Ethylene-responsive transcription factor WRI1 OS Arabidopsis thaliana GN WRI1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 43 216 + 174 Gaps:20 29.93 568 62.35 2e-46 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 66 202 + 137 Gaps:14 30.47 558 60.59 3e-45 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 43 216 + 174 Gaps:20 29.62 574 60.00 1e-44 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 53 202 + 150 Gaps:14 44.10 415 55.74 2e-44 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q94AN4|AP2L1_ARATH 53 224 + 172 Gaps:15 53.62 345 52.97 5e-44 AP2-like ethylene-responsive transcription factor At1g16060 OS Arabidopsis thaliana GN At1g16060 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 43 186 + 144 Gaps:11 29.36 579 59.41 5e-44 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q52QU2|AIL6_ARATH 66 185 + 120 Gaps:7 21.17 581 60.98 6e-44 AP2-like ethylene-responsive transcription factor AIL6 OS Arabidopsis thaliana GN AIL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L3U3|BBM1_BRANA 43 186 + 144 Gaps:11 29.36 579 59.41 8e-44 AP2-like ethylene-responsive transcription factor BBM1 OS Brassica napus GN BBM1 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 71 138 + 68 Gaps:12 96.88 64 45.16 4e-14 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 70 136 + 67 Gaps:6 100.00 61 44.26 4e-11 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 71 140 70 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
ProSiteProfiles 71 134 64 PS51032 none AP2/ERF domain profile. IPR001471
PANTHER 53 175 123 PTHR32467 none none IPR031112
SUPERFAMILY 70 135 66 SSF54171 none none IPR016177
Gene3D 71 135 65 G3DSA:3.30.730.10 none none IPR001471
Pfam 70 126 57 PF00847 none AP2 domain IPR001471
PRINTS 116 136 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 72 83 12 PR00367 none Ethylene responsive element binding protein signature IPR001471

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting