Protein : Qrob_P0323470.2 Q. robur
Protein Identifier  ? Qrob_P0323470.2 Organism . Name  Quercus robur
Score  95.2 Score Type  egn
Protein Description  (M=4) K01760 - cystathionine beta-lyase [EC:4.4.1.8] Code Enzyme  EC:4.4.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 240  
Kegg Orthology  K01760
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0004121 cystathionine beta-lyase activity Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.
GO:0071266 'de novo' L-methionine biosynthetic process The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020055mg 11 239 + 229 none 74.59 307 89.96 7e-151 hypothetical protein
blastp_kegg lcl|pop:POPTR_0016s03770g 11 239 + 229 none 49.35 464 90.39 7e-150 chloroplast cystathionine beta lyase family protein
blastp_kegg lcl|vvi:100260731 12 238 + 227 none 48.71 466 91.19 4e-149 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|cit:102608399 11 239 + 229 none 49.46 463 89.96 8e-149 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|gmx:100812354 12 239 + 228 none 48.82 467 88.60 1e-147 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|gmx:100786470 12 239 + 228 none 48.72 468 88.60 5e-147 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|cam:101495762 12 239 + 228 none 48.93 466 88.16 2e-146 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1444740 11 238 + 228 none 48.82 467 88.60 3e-146 cystathionine beta-lyase putative (EC:4.4.1.1)
blastp_kegg lcl|pvu:PHAVU_001G125400g 12 239 + 228 none 48.61 469 87.28 2e-145 hypothetical protein
blastp_kegg lcl|fve:101302911 12 239 + 228 none 48.41 471 87.72 3e-145 cystathionine beta-lyase chloroplastic-like
blastp_pdb 1ibj_C 12 239 + 228 none 49.14 464 84.21 1e-140 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1ibj_A 12 239 + 228 none 49.14 464 84.21 1e-140 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1n8p_D 12 235 + 224 Gaps:8 59.03 393 46.12 9e-62 mol:protein length:393 Cystathionine gamma-lyase
blastp_pdb 1n8p_C 12 235 + 224 Gaps:8 59.03 393 46.12 9e-62 mol:protein length:393 Cystathionine gamma-lyase
blastp_pdb 1n8p_B 12 235 + 224 Gaps:8 59.03 393 46.12 9e-62 mol:protein length:393 Cystathionine gamma-lyase
blastp_pdb 1n8p_A 12 235 + 224 Gaps:8 59.03 393 46.12 9e-62 mol:protein length:393 Cystathionine gamma-lyase
blastp_pdb 1pff_B 24 234 + 211 Gaps:1 64.05 331 46.70 1e-61 mol:protein length:331 methionine gamma-lyase
blastp_pdb 1pff_A 24 234 + 211 Gaps:1 64.05 331 46.70 1e-61 mol:protein length:331 methionine gamma-lyase
blastp_pdb 3nnp_B 5 234 + 230 Gaps:4 58.00 400 46.55 1e-61 mol:protein length:400 Cystathionine gamma-lyase-like protein
blastp_pdb 3nnp_A 5 234 + 230 Gaps:4 58.00 400 46.55 1e-61 mol:protein length:400 Cystathionine gamma-lyase-like protein
blastp_uniprot_sprot sp|P53780|METC_ARATH 12 239 + 228 none 49.14 464 84.21 5e-140 Cystathionine beta-lyase chloroplastic OS Arabidopsis thaliana GN At3g57050 PE 1 SV 1
blastp_uniprot_sprot sp|Q1K8G0|CBL_NEUCR 5 234 + 230 Gaps:4 50.33 457 52.17 4e-75 Cystathionine beta-lyase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN met-2 PE 1 SV 1
blastp_uniprot_sprot sp|O94350|CBL_SCHPO 18 234 + 217 Gaps:3 55.38 390 53.70 8e-74 Cystathionine beta-lyase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN str3 PE 3 SV 4
blastp_uniprot_sprot sp|O31632|METC_BACSU 12 235 + 224 none 57.44 390 48.66 2e-71 Cystathionine beta-lyase MetC OS Bacillus subtilis (strain 168) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|Q55DV9|CGL_DICDI 12 234 + 223 Gaps:1 57.88 387 48.21 1e-70 Cystathionine gamma-lyase OS Dictyostelium discoideum GN cysA PE 1 SV 1
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 14 235 + 222 none 58.58 379 48.20 4e-69 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 5 235 + 231 none 60.79 380 46.75 1e-68 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 5 235 + 231 none 60.79 380 46.75 1e-68 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1
blastp_uniprot_sprot sp|P0C2T9|METC_LACLC 5 235 + 231 none 60.79 380 46.32 8e-67 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P56069|METB_HELPY 5 234 + 230 none 60.53 380 46.09 6e-66 Cystathionine gamma-synthase OS Helicobacter pylori (strain ATCC 700392 / 26695) GN metB PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 5 101 97 G3DSA:3.40.640.10 none none IPR015421
PANTHER 12 235 224 PTHR11808:SF18 "KEGG:00270+4.4.1.8","KEGG:00450+4.4.1.8","MetaCyc:PWY-6936","UniPathway:UPA00051";signature_desc=CYSTATHIONINE BETA-LYASE (BETA-CYSTATHIONASE) none IPR006238
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 12 20 9 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 10 234 225 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277
Gene3D 102 235 134 G3DSA:3.90.1150.10 none none IPR015422
PANTHER 12 235 224 PTHR11808 none none IPR000277
ProSitePatterns 45 59 15 PS00868 none Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. IPR000277
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 6 235 230 SSF53383 none none IPR015424
Phobius 21 239 219 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 4 11 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting