Protein : Qrob_P0323460.2 Q. robur
Protein Identifier  ? Qrob_P0323460.2 Organism . Name  Quercus robur
Score  96.3 Score Type  egn
Protein Description  (M=4) K01760 - cystathionine beta-lyase [EC:4.4.1.8] Code Enzyme  EC:4.4.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 125  
Kegg Orthology  K01760
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0004121 cystathionine beta-lyase activity Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.
GO:0071266 'de novo' L-methionine biosynthetic process The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|ath:AT3G57050 2 123 + 122 none 26.29 464 72.95 6e-54 CBL cystathionine beta-lyase
blastp_kegg lcl|brp:103863064 2 123 + 122 none 26.24 465 72.95 9e-54 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|cmo:103502621 2 123 + 122 none 26.58 459 73.77 1e-53 cystathionine beta-lyase chloroplastic
blastp_kegg lcl|eus:EUTSA_v10005955mg 2 123 + 122 none 26.24 465 72.13 1e-53 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_486150 2 123 + 122 none 27.17 449 72.13 1e-53 CBL cystathionine beta-lyase
blastp_kegg lcl|crb:CARUB_v10017187mg 2 123 + 122 none 26.24 465 72.13 1e-53 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1444740 2 123 + 122 none 26.12 467 72.13 3e-53 cystathionine beta-lyase putative (EC:4.4.1.1)
blastp_kegg lcl|vvi:100260731 2 123 + 122 none 26.18 466 72.95 4e-53 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|brp:103841611 2 123 + 122 none 30.35 402 70.49 5e-53 cystathionine beta-lyase chloroplastic
blastp_kegg lcl|pop:POPTR_0016s03770g 2 123 + 122 none 26.29 464 72.95 9e-53 chloroplast cystathionine beta lyase family protein
blastp_pdb 1ibj_C 2 123 + 122 none 26.29 464 72.95 6e-56 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1ibj_A 2 123 + 122 none 26.29 464 72.95 6e-56 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 3cog_D 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_C 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_B 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_A 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 2nmp_D 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 2nmp_C 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 2nmp_B 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 2nmp_A 11 123 + 113 none 28.04 403 41.59 1e-25 mol:protein length:403 Cystathionine gamma-lyase
blastp_uniprot_sprot sp|P53780|METC_ARATH 2 123 + 122 none 26.29 464 72.95 2e-55 Cystathionine beta-lyase chloroplastic OS Arabidopsis thaliana GN At3g57050 PE 1 SV 1
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 2 122 + 121 none 31.93 379 45.45 1e-28 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|Q1K8G0|CBL_NEUCR 2 122 + 121 none 26.48 457 45.45 4e-28 Cystathionine beta-lyase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN met-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q1M0P5|METB_HELPX 11 122 + 112 none 29.47 380 42.86 2e-26 Cystathionine gamma-synthase OS Helicobacter pylori GN metB PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZMW7|METB_HELPJ 11 122 + 112 none 29.47 380 42.86 2e-26 Cystathionine gamma-synthase OS Helicobacter pylori (strain J99 / ATCC 700824) GN metB PE 3 SV 1
blastp_uniprot_sprot sp|P0C2T9|METC_LACLC 11 123 + 113 none 29.74 380 41.59 6e-26 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P56069|METB_HELPY 11 122 + 112 none 29.47 380 41.07 1e-25 Cystathionine gamma-synthase OS Helicobacter pylori (strain ATCC 700392 / 26695) GN metB PE 1 SV 1
blastp_uniprot_sprot sp|O94350|CBL_SCHPO 2 123 + 122 none 31.28 390 46.72 2e-25 Cystathionine beta-lyase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN str3 PE 3 SV 4
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 11 123 + 113 none 29.74 380 39.82 3e-25 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 11 123 + 113 none 29.74 380 39.82 3e-25 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 123 122 PTHR11808 none none IPR000277
SUPERFAMILY 8 123 116 SSF53383 none none IPR015424
Gene3D 8 123 116 G3DSA:3.40.640.10 none none IPR015421
PANTHER 2 123 122 PTHR11808:SF18 "KEGG:00270+4.4.1.8","KEGG:00450+4.4.1.8","MetaCyc:PWY-6936","UniPathway:UPA00051";signature_desc=CYSTATHIONINE BETA-LYASE (BETA-CYSTATHIONASE) none IPR006238
Pfam 9 123 115 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting