Protein : Qrob_P0323440.2 Q. robur
Protein Identifier  ? Qrob_P0323440.2 Organism . Name  Quercus robur
Score  95.2 Score Type  egn
Protein Description  (M=4) K01760 - cystathionine beta-lyase [EC:4.4.1.8] Code Enzyme  EC:4.4.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 136  
Kegg Orthology  K01760
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0004121 cystathionine beta-lyase activity Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.
GO:0071266 'de novo' L-methionine biosynthetic process The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020055mg 7 135 + 129 none 42.02 307 92.25 1e-79 hypothetical protein
blastp_kegg lcl|gmx:100812354 7 135 + 129 none 27.62 467 95.35 1e-78 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|cit:102608399 7 135 + 129 none 27.86 463 92.25 5e-78 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|tcc:TCM_024360 3 135 + 133 none 27.48 484 90.23 3e-77 Cystathionine beta-lyase isoform 1
blastp_kegg lcl|gmx:100786470 7 135 + 129 none 27.56 468 93.80 3e-77 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_001G125400g 7 135 + 129 none 27.51 469 92.25 5e-77 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1444740 7 134 + 128 none 27.41 467 92.19 2e-76 cystathionine beta-lyase putative (EC:4.4.1.1)
blastp_kegg lcl|pop:POPTR_0016s03770g 7 135 + 129 none 27.80 464 90.70 3e-76 chloroplast cystathionine beta lyase family protein
blastp_kegg lcl|csv:101216175 7 134 + 128 none 27.89 459 90.62 1e-75 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|cmo:103502621 7 134 + 128 none 27.89 459 89.84 5e-75 cystathionine beta-lyase chloroplastic
blastp_pdb 1ibj_C 7 135 + 129 none 27.80 464 83.72 5e-72 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1ibj_A 7 135 + 129 none 27.80 464 83.72 5e-72 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1pff_B 8 130 + 123 none 37.16 331 48.78 7e-34 mol:protein length:331 methionine gamma-lyase
blastp_pdb 1pff_A 8 130 + 123 none 37.16 331 48.78 7e-34 mol:protein length:331 methionine gamma-lyase
blastp_pdb 1e5f_B 8 130 + 123 Gaps:1 30.69 404 44.35 8e-31 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5f_A 8 130 + 123 Gaps:1 30.69 404 44.35 8e-31 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5e_B 8 130 + 123 Gaps:1 30.69 404 44.35 8e-31 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 1e5e_A 8 130 + 123 Gaps:1 30.69 404 44.35 8e-31 mol:protein length:404 METHIONINE GAMMA-LYASE
blastp_pdb 3nnp_B 8 130 + 123 Gaps:1 31.00 400 43.55 1e-27 mol:protein length:400 Cystathionine gamma-lyase-like protein
blastp_pdb 3nnp_A 8 130 + 123 Gaps:1 31.00 400 43.55 1e-27 mol:protein length:400 Cystathionine gamma-lyase-like protein
blastp_uniprot_sprot sp|P53780|METC_ARATH 7 135 + 129 none 27.80 464 83.72 2e-71 Cystathionine beta-lyase chloroplastic OS Arabidopsis thaliana GN At3g57050 PE 1 SV 1
blastp_uniprot_sprot sp|Q1K8G0|CBL_NEUCR 7 130 + 124 Gaps:2 26.70 457 60.66 1e-40 Cystathionine beta-lyase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN met-2 PE 1 SV 1
blastp_uniprot_sprot sp|O94350|CBL_SCHPO 7 130 + 124 Gaps:3 31.54 390 58.54 4e-36 Cystathionine beta-lyase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN str3 PE 3 SV 4
blastp_uniprot_sprot sp|O31632|METC_BACSU 9 131 + 123 none 31.54 390 49.59 1e-33 Cystathionine beta-lyase MetC OS Bacillus subtilis (strain 168) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 9 131 + 123 none 32.45 379 49.59 5e-32 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|Q55DV9|CGL_DICDI 7 130 + 124 Gaps:1 32.30 387 47.20 6e-32 Cystathionine gamma-lyase OS Dictyostelium discoideum GN cysA PE 1 SV 1
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 9 131 + 123 none 32.37 380 45.53 4e-30 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 9 131 + 123 none 32.37 380 45.53 4e-30 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1
blastp_uniprot_sprot sp|P0C2T9|METC_LACLC 9 131 + 123 none 32.37 380 45.53 1e-29 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris GN metC PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZMW7|METB_HELPJ 7 130 + 124 none 32.63 380 45.16 9e-29 Cystathionine gamma-synthase OS Helicobacter pylori (strain J99 / ATCC 700824) GN metB PE 3 SV 1

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 7 131 125 SSF53383 none none IPR015424
PANTHER 7 131 125 PTHR11808 none none IPR000277
PANTHER 7 131 125 PTHR11808:SF18 "KEGG:00270+4.4.1.8","KEGG:00450+4.4.1.8","MetaCyc:PWY-6936","UniPathway:UPA00051";signature_desc=CYSTATHIONINE BETA-LYASE (BETA-CYSTATHIONASE) none IPR006238
Pfam 7 130 124 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277
Gene3D 7 131 125 G3DSA:3.90.1150.10 none none IPR015422

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting