Protein : Qrob_P0323430.2 Q. robur
Protein Identifier  ? Qrob_P0323430.2 Organism . Name  Quercus robur
Score  82.1 Score Type  egn
Protein Description  (M=4) K01760 - cystathionine beta-lyase [EC:4.4.1.8] Code Enzyme  EC:4.4.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 238  
Kegg Orthology  K01760
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0004121 cystathionine beta-lyase activity Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.
GO:0071266 'de novo' L-methionine biosynthetic process The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102608399 2 236 + 235 none 50.76 463 87.23 1e-148 cystathionine beta-lyase chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1444740 2 236 + 235 none 50.32 467 85.11 3e-146 cystathionine beta-lyase putative (EC:4.4.1.1)
blastp_kegg lcl|pmum:103339313 2 236 + 235 none 49.68 473 88.09 3e-143 cystathionine beta-lyase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa005188mg 2 236 + 235 none 49.68 473 88.09 3e-143 hypothetical protein
blastp_kegg lcl|pop:POPTR_0016s03770g 2 236 + 235 none 50.65 464 84.68 2e-142 chloroplast cystathionine beta lyase family protein
blastp_kegg lcl|brp:103841611 2 236 + 235 none 58.46 402 82.55 3e-142 cystathionine beta-lyase chloroplastic
blastp_kegg lcl|crb:CARUB_v10017187mg 2 236 + 235 none 50.54 465 83.40 3e-142 hypothetical protein
blastp_kegg lcl|mdm:103449879 2 236 + 235 none 55.04 427 86.38 5e-142 cystathionine beta-lyase chloroplastic
blastp_kegg lcl|eus:EUTSA_v10005955mg 2 236 + 235 none 50.54 465 82.55 6e-142 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_486150 2 236 + 235 none 52.34 449 82.13 1e-141 CBL cystathionine beta-lyase
blastp_pdb 1ibj_C 2 236 + 235 none 50.65 464 81.70 3e-143 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 1ibj_A 2 236 + 235 none 50.65 464 81.70 3e-143 mol:protein length:464 CYSTATHIONINE BETA-LYASE
blastp_pdb 3elp_D 2 221 + 220 Gaps:1 53.90 410 45.70 5e-68 mol:protein length:410 Cystathionine gamma-lyase
blastp_pdb 3elp_C 2 221 + 220 Gaps:1 53.90 410 45.70 5e-68 mol:protein length:410 Cystathionine gamma-lyase
blastp_pdb 3elp_A 2 221 + 220 Gaps:1 53.90 410 45.70 5e-68 mol:protein length:410 Cystathionine gamma-lyase
blastp_pdb 3elp_B 2 221 + 220 Gaps:1 53.90 410 45.70 5e-68 mol:protein length:410 Cystathionine gamma-lyase
blastp_pdb 3cog_D 2 221 + 220 Gaps:1 54.84 403 45.70 5e-68 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_C 2 221 + 220 Gaps:1 54.84 403 45.70 5e-68 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_B 2 221 + 220 Gaps:1 54.84 403 45.70 5e-68 mol:protein length:403 Cystathionine gamma-lyase
blastp_pdb 3cog_A 2 221 + 220 Gaps:1 54.84 403 45.70 5e-68 mol:protein length:403 Cystathionine gamma-lyase
blastp_uniprot_sprot sp|P53780|METC_ARATH 2 236 + 235 none 50.65 464 81.70 1e-142 Cystathionine beta-lyase chloroplastic OS Arabidopsis thaliana GN At3g57050 PE 1 SV 1
blastp_uniprot_sprot sp|Q1K8G0|CBL_NEUCR 2 237 + 236 Gaps:2 52.08 457 47.48 5e-71 Cystathionine beta-lyase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN met-2 PE 1 SV 1
blastp_uniprot_sprot sp|A2RM21|METC_LACLM 11 236 + 226 Gaps:8 61.58 380 45.73 1e-70 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris (strain MG1363) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|P0A4K2|METC_LACLA 11 236 + 226 Gaps:8 61.58 380 45.73 1e-70 Cystathionine beta-lyase OS Lactococcus lactis subsp. lactis (strain IL1403) GN metC PE 3 SV 1
blastp_uniprot_sprot sp|O31632|METC_BACSU 2 236 + 235 none 60.26 390 45.11 2e-70 Cystathionine beta-lyase MetC OS Bacillus subtilis (strain 168) GN metC PE 1 SV 1
blastp_uniprot_sprot sp|O05394|MCCB_BACSU 2 219 + 218 none 57.52 379 47.25 5e-70 Cystathionine gamma-lyase OS Bacillus subtilis (strain 168) GN mccB PE 1 SV 1
blastp_uniprot_sprot sp|Q55DV9|CGL_DICDI 1 222 + 222 Gaps:1 57.62 387 46.64 1e-69 Cystathionine gamma-lyase OS Dictyostelium discoideum GN cysA PE 1 SV 1
blastp_uniprot_sprot sp|P0C2T9|METC_LACLC 11 236 + 226 Gaps:8 61.58 380 45.30 1e-68 Cystathionine beta-lyase OS Lactococcus lactis subsp. cremoris GN metC PE 1 SV 1
blastp_uniprot_sprot sp|Q1M0P5|METB_HELPX 11 222 + 212 none 55.79 380 48.58 2e-68 Cystathionine gamma-synthase OS Helicobacter pylori GN metB PE 1 SV 1
blastp_uniprot_sprot sp|O94350|CBL_SCHPO 2 222 + 221 Gaps:2 57.18 390 49.78 4e-68 Cystathionine beta-lyase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN str3 PE 3 SV 4

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 5 212 208 G3DSA:3.40.640.10 none none IPR015421
ProSitePatterns 156 170 15 PS00868 none Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. IPR000277
PANTHER 2 222 221 PTHR11808 none none IPR000277
SUPERFAMILY 6 232 227 SSF53383 none none IPR015424
Pfam 6 232 227 PF01053 none Cys/Met metabolism PLP-dependent enzyme IPR000277
PANTHER 2 222 221 PTHR11808:SF18 "KEGG:00270+4.4.1.8","KEGG:00450+4.4.1.8","MetaCyc:PWY-6936","UniPathway:UPA00051";signature_desc=CYSTATHIONINE BETA-LYASE (BETA-CYSTATHIONASE) none IPR006238

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting