Protein : Qrob_P0322680.2 Q. robur
Protein Identifier  ? Qrob_P0322680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=23) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 509  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004465mg 1 508 + 508 none 100.00 508 82.09 0.0 hypothetical protein
blastp_kegg lcl|pmum:103333380 1 508 + 508 none 100.00 508 82.09 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|tcc:TCM_014880 1 506 + 506 none 99.80 507 82.61 0.0 Major facilitator superfamily protein
blastp_kegg lcl|vvi:100232949 1 506 + 506 none 99.61 508 81.62 0.0 HT4 hexose transporter-like
blastp_kegg lcl|pxb:103952749 1 508 + 508 Gaps:1 100.00 509 80.55 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cic:CICLE_v10004775mg 1 506 + 506 Gaps:3 99.61 511 81.14 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1501000 1 504 + 504 none 98.82 510 82.54 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|mdm:103430931 1 508 + 508 none 100.00 508 79.72 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cit:102617143 1 506 + 506 Gaps:3 99.61 511 80.75 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|tcc:TCM_014877 1 507 + 507 none 99.41 510 80.08 0.0 Major facilitator superfamily protein
blastp_uniprot_sprot sp|Q07423|HEX6_RICCO 1 504 + 504 none 98.82 510 82.34 0.0 Hexose carrier protein HEX6 OS Ricinus communis GN HEX6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L7R8|STP3_ARATH 16 498 + 483 Gaps:9 94.55 514 68.11 0.0 Sugar transport protein 3 OS Arabidopsis thaliana GN STP3 PE 2 SV 2
blastp_uniprot_sprot sp|Q41144|STC_RICCO 7 496 + 490 Gaps:7 94.65 523 60.40 0.0 Sugar carrier protein C OS Ricinus communis GN STC PE 2 SV 1
blastp_uniprot_sprot sp|P23586|STP1_ARATH 2 498 + 497 Gaps:4 95.59 522 59.12 0.0 Sugar transport protein 1 OS Arabidopsis thaliana GN STP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LT15|STP10_ARATH 18 498 + 481 Gaps:4 93.58 514 58.42 0.0 Sugar transport protein 10 OS Arabidopsis thaliana GN STP10 PE 2 SV 1
blastp_uniprot_sprot sp|O04249|STP7_ARATH 3 504 + 502 Gaps:7 97.66 513 56.29 0.0 Sugar transport protein 7 OS Arabidopsis thaliana GN STP7 PE 2 SV 1
blastp_uniprot_sprot sp|Q94AZ2|STP13_ARATH 4 507 + 504 Gaps:4 96.20 526 55.73 0.0 Sugar transport protein 13 OS Arabidopsis thaliana GN STP13 PE 1 SV 2
blastp_uniprot_sprot sp|Q39228|STP4_ARATH 1 498 + 498 Gaps:5 97.08 514 58.32 0.0 Sugar transport protein 4 OS Arabidopsis thaliana GN STP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SX48|STP9_ARATH 18 494 + 477 Gaps:5 92.46 517 58.58 0.0 Sugar transport protein 9 OS Arabidopsis thaliana GN STP9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FMX3|STP11_ARATH 8 494 + 487 Gaps:4 95.14 514 57.26 0.0 Sugar transport protein 11 OS Arabidopsis thaliana GN STP11 PE 1 SV 1
rpsblast_cdd gnl|CDD|200987 26 486 + 461 Gaps:21 99.78 449 35.04 4e-88 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 3 482 + 480 Gaps:29 98.75 481 36.00 2e-79 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 15 488 + 474 Gaps:88 98.54 479 29.03 4e-56 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|188094 134 430 + 297 Gaps:47 65.99 394 25.77 6e-12 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|162097 77 481 + 405 Gaps:43 75.25 505 22.37 4e-11 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|119392 76 222 + 147 Gaps:3 40.91 352 27.78 3e-10 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|191813 85 436 + 352 Gaps:45 88.73 346 19.22 7e-09 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|162095 93 351 + 259 Gaps:18 63.57 398 22.92 2e-08 TIGR00895 2A0115 benzoate transport.
rpsblast_kog gnl|CDD|35475 14 495 + 482 Gaps:22 92.40 513 33.33 3e-75 KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
rpsblast_kog gnl|CDD|35789 15 481 + 467 Gaps:20 95.46 485 28.51 2e-56 KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].

41 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 320 342 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 451 471 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 80 99 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 13 506 494 PTHR24063 none none none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 404 423 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 294 304 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 136 155 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 388 409 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 33 43 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 411 423 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 199 221 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 169 187 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 283 62 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 349 371 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 100 110 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 45 234 190 G3DSA:1.20.1250.20 none none none
TIGRFAM 12 481 470 TIGR00879 "Reactome:REACT_15518" SP: MFS transporter, sugar porter (SP) family IPR003663
ProSiteProfiles 25 475 451 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 343 348 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 286 478 193 G3DSA:1.20.1250.20 none none none
Phobius 383 403 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 446 450 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 131 135 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 20 38 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 141 166 26 PS00217 none Sugar transport proteins signature 2. IPR005829
Phobius 136 157 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 372 382 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 284 308 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 158 168 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

12 Localization

Analysis Start End Length
TMHMM 349 371 22
TMHMM 452 471 19
TMHMM 109 131 22
TMHMM 136 158 22
TMHMM 80 102 22
TMHMM 320 342 22
TMHMM 20 42 22
TMHMM 420 442 22
TMHMM 167 189 22
TMHMM 386 408 22
TMHMM 199 221 22
TMHMM 288 310 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting