Protein : Qrob_P0322660.2 Q. robur
Protein Identifier  ? Qrob_P0322660.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=23) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 514  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014880 1 507 + 507 Gaps:5 99.01 507 78.69 0.0 Major facilitator superfamily protein
blastp_kegg lcl|pper:PRUPE_ppa004465mg 1 513 + 513 Gaps:5 100.00 508 77.36 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_014877 1 507 + 507 Gaps:5 98.43 510 78.69 0.0 Major facilitator superfamily protein
blastp_kegg lcl|pmum:103333380 1 513 + 513 Gaps:5 100.00 508 77.17 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cic:CICLE_v10004779mg 1 511 + 511 Gaps:7 99.41 511 77.36 0.0 hypothetical protein
blastp_kegg lcl|mdm:103430931 1 513 + 513 Gaps:5 100.00 508 76.18 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cit:102617435 1 507 + 507 Gaps:7 99.80 505 76.39 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cit:102618752 1 507 + 507 Gaps:7 99.80 505 76.19 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|pxb:103952749 1 513 + 513 Gaps:6 100.00 509 76.42 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|rcu:RCOM_1501000 1 511 + 511 Gaps:5 99.22 510 77.67 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_uniprot_sprot sp|Q07423|HEX6_RICCO 1 511 + 511 Gaps:5 99.22 510 77.47 0.0 Hexose carrier protein HEX6 OS Ricinus communis GN HEX6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L7R8|STP3_ARATH 17 505 + 489 Gaps:16 94.75 514 62.83 0.0 Sugar transport protein 3 OS Arabidopsis thaliana GN STP3 PE 2 SV 2
blastp_uniprot_sprot sp|Q94AZ2|STP13_ARATH 4 508 + 505 Gaps:9 95.44 526 56.18 0.0 Sugar transport protein 13 OS Arabidopsis thaliana GN STP13 PE 1 SV 2
blastp_uniprot_sprot sp|P23586|STP1_ARATH 2 503 + 502 Gaps:9 95.59 522 56.91 0.0 Sugar transport protein 1 OS Arabidopsis thaliana GN STP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q41144|STC_RICCO 14 507 + 494 Gaps:11 93.50 523 58.28 0.0 Sugar carrier protein C OS Ricinus communis GN STC PE 2 SV 1
blastp_uniprot_sprot sp|O04249|STP7_ARATH 13 511 + 499 Gaps:10 96.10 513 54.77 0.0 Sugar transport protein 7 OS Arabidopsis thaliana GN STP7 PE 2 SV 1
blastp_uniprot_sprot sp|Q39228|STP4_ARATH 13 503 + 491 Gaps:9 94.55 514 58.64 0.0 Sugar transport protein 4 OS Arabidopsis thaliana GN STP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SX48|STP9_ARATH 18 511 + 494 Gaps:16 95.94 517 56.25 0.0 Sugar transport protein 9 OS Arabidopsis thaliana GN STP9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LT15|STP10_ARATH 18 503 + 486 Gaps:9 93.58 514 54.47 0.0 Sugar transport protein 10 OS Arabidopsis thaliana GN STP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FMX3|STP11_ARATH 12 499 + 488 Gaps:9 94.36 514 55.26 0.0 Sugar transport protein 11 OS Arabidopsis thaliana GN STP11 PE 1 SV 1
rpsblast_cdd gnl|CDD|200987 26 491 + 466 Gaps:26 99.78 449 34.38 6e-85 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 14 487 + 474 Gaps:32 96.47 481 36.21 1e-80 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 27 493 + 467 Gaps:103 96.03 479 29.78 3e-50 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162097 77 486 + 410 Gaps:48 75.25 505 22.89 2e-16 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|119392 70 227 + 158 Gaps:8 42.61 352 26.00 9e-10 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|191813 85 443 + 359 Gaps:50 89.31 346 18.45 3e-09 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|188094 138 474 + 337 Gaps:54 74.37 394 23.55 4e-08 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|32643 90 475 + 386 Gaps:68 82.74 394 18.71 1e-06 COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism].
rpsblast_kog gnl|CDD|35475 13 499 + 487 Gaps:27 92.40 513 34.18 8e-74 KOG0254 KOG0254 KOG0254 Predicted transporter (major facilitator superfamily) [General function prediction only].
rpsblast_kog gnl|CDD|35789 17 489 + 473 Gaps:25 95.67 485 28.45 2e-57 KOG0569 KOG0569 KOG0569 Permease of the major facilitator superfamily [Carbohydrate transport and metabolism].

40 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 21 38 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 43 239 197 G3DSA:1.20.1250.20 none none none
Gene3D 290 481 192 G3DSA:1.20.1250.20 none none none
PANTHER 10 510 501 PTHR24063 none none none
ProSiteProfiles 25 480 456 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 101 111 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 299 309 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 393 414 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 33 43 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 416 428 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 136 155 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 325 347 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 12 486 475 TIGR00879 "Reactome:REACT_15518" SP: MFS transporter, sugar porter (SP) family IPR003663
Phobius 426 450 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 80 100 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 135 139 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 193 203 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 388 414 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 268 488 221 SSF103473 none none IPR020846
SUPERFAMILY 29 241 213 SSF103473 none none IPR020846
Phobius 456 476 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 314 324 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 377 387 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 204 226 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 39 79 41 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 227 288 62 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 289 313 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 451 455 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 140 162 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 163 173 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

12 Localization

Analysis Start End Length
TMHMM 325 347 22
TMHMM 172 194 22
TMHMM 425 447 22
TMHMM 288 310 22
TMHMM 21 43 22
TMHMM 141 163 22
TMHMM 391 413 22
TMHMM 115 137 22
TMHMM 204 226 22
TMHMM 354 376 22
TMHMM 80 102 22
TMHMM 457 476 19

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting