Protein : Qrob_P0322630.2 Q. robur
Protein Identifier  ? Qrob_P0322630.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=23) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 519  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_014880 1 516 + 516 Gaps:10 99.80 507 81.62 0.0 Major facilitator superfamily protein
blastp_kegg lcl|tcc:TCM_014877 1 518 + 518 Gaps:10 99.61 510 80.91 0.0 Major facilitator superfamily protein
blastp_kegg lcl|pmum:103333380 1 517 + 517 Gaps:10 99.80 508 79.68 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|pper:PRUPE_ppa004465mg 1 517 + 517 Gaps:10 99.80 508 79.49 0.0 hypothetical protein
blastp_kegg lcl|vvi:100232949 1 518 + 518 Gaps:10 100.00 508 79.53 0.0 HT4 hexose transporter-like
blastp_kegg lcl|rcu:RCOM_1501000 1 518 + 518 Gaps:12 100.00 510 79.61 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|cic:CICLE_v10004775mg 1 518 + 518 Gaps:13 100.00 511 78.28 0.0 hypothetical protein
blastp_kegg lcl|mdm:103430931 1 517 + 517 Gaps:10 99.80 508 77.91 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|cit:102617143 1 518 + 518 Gaps:13 100.00 511 77.69 0.0 hexose carrier protein HEX6-like
blastp_kegg lcl|pxb:103952749 1 517 + 517 Gaps:11 99.80 509 77.95 0.0 hexose carrier protein HEX6-like
blastp_uniprot_sprot sp|Q07423|HEX6_RICCO 1 518 + 518 Gaps:12 100.00 510 79.41 0.0 Hexose carrier protein HEX6 OS Ricinus communis GN HEX6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L7R8|STP3_ARATH 17 514 + 498 Gaps:21 95.14 514 62.99 0.0 Sugar transport protein 3 OS Arabidopsis thaliana GN STP3 PE 2 SV 2
blastp_uniprot_sprot sp|Q41144|STC_RICCO 14 512 + 499 Gaps:16 93.50 523 60.33 0.0 Sugar carrier protein C OS Ricinus communis GN STC PE 2 SV 1
blastp_uniprot_sprot sp|Q94AZ2|STP13_ARATH 4 511 + 508 Gaps:14 95.06 526 56.40 0.0 Sugar transport protein 13 OS Arabidopsis thaliana GN STP13 PE 1 SV 2
blastp_uniprot_sprot sp|O04249|STP7_ARATH 4 512 + 509 Gaps:16 96.88 513 56.94 0.0 Sugar transport protein 7 OS Arabidopsis thaliana GN STP7 PE 2 SV 1
blastp_uniprot_sprot sp|P23586|STP1_ARATH 11 515 + 505 Gaps:18 95.98 522 58.48 0.0 Sugar transport protein 1 OS Arabidopsis thaliana GN STP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q39228|STP4_ARATH 5 518 + 514 Gaps:16 97.67 514 58.76 0.0 Sugar transport protein 4 OS Arabidopsis thaliana GN STP4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LT15|STP10_ARATH 18 508 + 491 Gaps:14 93.58 514 57.38 0.0 Sugar transport protein 10 OS Arabidopsis thaliana GN STP10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SX48|STP9_ARATH 18 504 + 487 Gaps:15 92.46 517 59.00 0.0 Sugar transport protein 9 OS Arabidopsis thaliana GN STP9 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FMX3|STP11_ARATH 5 504 + 500 Gaps:14 95.72 514 56.50 0.0 Sugar transport protein 11 OS Arabidopsis thaliana GN STP11 PE 1 SV 1
rpsblast_cdd gnl|CDD|200987 26 496 + 471 Gaps:31 99.78 449 34.60 4e-86 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 14 492 + 479 Gaps:37 96.47 481 35.34 9e-78 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 27 498 + 472 Gaps:82 96.03 479 30.22 4e-53 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162097 87 491 + 405 Gaps:55 75.25 505 24.74 5e-15 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|191813 95 448 + 354 Gaps:47 89.31 346 21.04 2e-12 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|119392 80 482 + 403 Gaps:19 93.18 352 24.39 3e-12 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|188094 148 473 + 326 Gaps:48 73.10 394 24.31 3e-11 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.
rpsblast_cdd gnl|CDD|162095 100 370 + 271 Gaps:22 67.59 398 24.16 7e-10 TIGR00895 2A0115 benzoate transport.
rpsblast_cdd gnl|CDD|32643 100 480 + 381 Gaps:63 82.74 394 19.33 5e-08 COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism].
rpsblast_cdd gnl|CDD|129965 114 494 + 381 Gaps:64 82.67 502 24.82 1e-07 TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

39 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 456 461 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 358 381 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 118 128 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 146 165 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 421 433 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 33 43 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 304 314 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 398 419 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Gene3D 295 488 194 G3DSA:1.20.1250.20 none none none
Phobius 393 413 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 20 38 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 84 248 165 G3DSA:1.20.1250.20 none none none
Phobius 212 231 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 26 496 471 PF00083 none Sugar (and other) transporter IPR005828
Phobius 232 293 62 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 348 365 18 PS00216 none Sugar transport proteins signature 1. IPR005829
PANTHER 10 518 509 PTHR24063 none none none
Phobius 414 432 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 98 117 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 382 392 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 84 246 163 SSF103473 none none IPR020846
SUPERFAMILY 273 493 221 SSF103473 none none IPR020846
ProSiteProfiles 25 485 461 PS50850 none Major facilitator superfamily (MFS) profile. IPR020846
Phobius 320 330 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 294 319 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 331 352 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 129 158 30 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 10 518 509 PTHR24063:SF312 none none none
Phobius 433 455 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 482 518 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

12 Localization

Analysis Start End Length
TMHMM 145 167 22
TMHMM 430 452 22
TMHMM 298 320 22
TMHMM 462 481 19
TMHMM 330 352 22
TMHMM 20 42 22
TMHMM 396 418 22
TMHMM 90 112 22
TMHMM 180 199 19
TMHMM 121 140 19
TMHMM 359 381 22
TMHMM 209 231 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting