Protein : Qrob_P0322610.2 Q. robur
Protein Identifier  ? Qrob_P0322610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31407:SF6 - OXYGEN-EVOLVING ENHANCER PROTEIN 2-1, CHLOROPLASTIC-RELATED (PTHR31407:SF6) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 277  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0009523 photosystem II A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.
GO:0009654 photosystem II oxygen evolving complex A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).
GO:0019898 extrinsic component of membrane The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100252244 1 276 + 276 Gaps:3 100.00 279 78.14 1e-156 psbP domain-containing protein 4 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0002s07330g 1 276 + 276 Gaps:2 100.00 276 79.35 1e-154 POPTRDRAFT_1071506 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0138880 1 276 + 276 Gaps:8 100.00 270 79.63 1e-152 Thylakoid lumenal 29.8 kDa protein chloroplast precursor putative
blastp_kegg lcl|tcc:TCM_035418 1 276 + 276 Gaps:3 100.00 277 77.62 2e-150 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
blastp_kegg lcl|fve:101294128 1 276 + 276 none 100.00 276 75.00 1e-147 psbP domain-containing protein 4 chloroplastic-like
blastp_kegg lcl|pmum:103336432 1 276 + 276 Gaps:5 100.00 271 77.49 1e-146 psbP domain-containing protein 4 chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa009933mg 1 276 + 276 Gaps:5 100.00 271 77.12 3e-145 hypothetical protein
blastp_kegg lcl|pxb:103966283 1 276 + 276 Gaps:1 100.00 277 76.17 3e-145 psbP domain-containing protein 4 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10002228mg 1 276 + 276 Gaps:20 100.00 256 80.86 3e-143 hypothetical protein
blastp_kegg lcl|mdm:103426889 1 276 + 276 Gaps:1 100.00 277 75.09 9e-143 psbP domain-containing protein 4 chloroplastic-like
blastp_uniprot_sprot sp|O49292|PPD4_ARATH 48 276 + 229 Gaps:3 88.46 260 78.70 5e-126 PsbP domain-containing protein 4 chloroplastic OS Arabidopsis thaliana GN PPD4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LXX5|PPD6_ARATH 131 275 + 145 Gaps:21 60.31 262 34.18 3e-18 PsbP domain-containing protein 6 chloroplastic OS Arabidopsis thaliana GN PPD6 PE 1 SV 1
blastp_uniprot_sprot sp|P82658|TL19_ARATH 132 276 + 145 Gaps:16 61.57 229 32.62 2e-10 Thylakoid lumenal 19 kDa protein chloroplastic OS Arabidopsis thaliana GN At3g63540 PE 1 SV 2
rpsblast_cdd gnl|CDD|177696 9 276 + 268 Gaps:13 98.85 262 66.02 1e-113 PLN00066 PLN00066 PsbP domain-containing protein 4 Provisional.
rpsblast_cdd gnl|CDD|177697 131 275 + 145 Gaps:21 60.08 263 35.44 2e-20 PLN00067 PLN00067 PsbP domain-containing protein 6 Provisional.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 132 275 144 PF01789 none PsbP IPR002683
SUPERFAMILY 124 275 152 SSF55724 none none IPR016123
Gene3D 118 276 159 G3DSA:3.40.1000.10 none none IPR016123
PANTHER 61 276 216 PTHR31407:SF6 none none none
PANTHER 61 276 216 PTHR31407 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting