Protein : Qrob_P0315420.2 Q. robur
Protein Identifier  ? Qrob_P0315420.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K12449 - UDP-apiose/xylose synthase Gene Prediction Quality  validated
Protein length 

Sequence

Length: 388  
Kegg Orthology  K12449
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050662 coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103929854 2 387 + 386 none 99.23 389 91.19 0.0 UDP-D-apiose/UDP-D-xylose synthase 2-like
blastp_kegg lcl|pxb:103954739 2 386 + 385 none 98.97 389 91.17 0.0 UDP-D-apiose/UDP-D-xylose synthase 2
blastp_kegg lcl|mdm:103448012 2 387 + 386 none 99.23 389 90.93 0.0 UDP-D-apiose/UDP-D-xylose synthase 2
blastp_kegg lcl|fve:101301757 2 386 + 385 none 98.47 391 90.39 0.0 bifunctional polymyxin resistance protein ArnA-like
blastp_kegg lcl|pper:PRUPE_ppa006917mg 2 386 + 385 none 98.72 390 90.91 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326554 2 386 + 385 none 98.72 390 90.39 0.0 UDP-D-apiose/UDP-D-xylose synthase 2
blastp_kegg lcl|mdm:103423813 2 387 + 386 none 99.23 389 90.16 0.0 UDP-D-apiose/UDP-D-xylose synthase 2-like
blastp_kegg lcl|vvi:100248193 2 387 + 386 Gaps:1 99.23 388 91.43 0.0 bifunctional polymyxin resistance protein ArnA-like
blastp_kegg lcl|tcc:TCM_041534 1 387 + 387 Gaps:1 85.59 451 90.41 0.0 UDP-D-apiose/UDP-D-xylose synthase 2
blastp_kegg lcl|vvi:100262362 2 387 + 386 Gaps:1 99.23 388 90.13 0.0 bifunctional polymyxin resistance protein ArnA-like
blastp_pdb 2bll_A 15 372 + 358 Gaps:29 97.68 345 38.28 9e-69 mol:protein length:345 PROTEIN YFBG
blastp_pdb 1z73_A 17 372 + 356 Gaps:29 93.58 358 38.51 1e-68 mol:protein length:358 protein ArnA
blastp_pdb 1u9j_A 17 372 + 356 Gaps:29 93.58 358 38.51 1e-68 mol:protein length:358 Hypothetical protein yfbG
blastp_pdb 1z7b_A 17 372 + 356 Gaps:29 93.58 358 38.21 1e-67 mol:protein length:358 protein ArnA
blastp_pdb 1z74_A 17 372 + 356 Gaps:29 93.58 358 38.21 2e-67 mol:protein length:358 protein ArnA
blastp_pdb 1z75_A 17 372 + 356 Gaps:29 93.58 358 38.21 2e-67 mol:protein length:358 protein ArnA
blastp_pdb 3slg_F 12 366 + 355 Gaps:32 89.52 372 38.14 2e-66 mol:protein length:372 PbgP3 protein
blastp_pdb 3slg_E 12 366 + 355 Gaps:32 89.52 372 38.14 2e-66 mol:protein length:372 PbgP3 protein
blastp_pdb 3slg_D 12 366 + 355 Gaps:32 89.52 372 38.14 2e-66 mol:protein length:372 PbgP3 protein
blastp_pdb 3slg_C 12 366 + 355 Gaps:32 89.52 372 38.14 2e-66 mol:protein length:372 PbgP3 protein
blastp_uniprot_sprot sp|Q9SGE0|AXS2_ARATH 2 387 + 386 Gaps:1 98.97 389 87.53 0.0 UDP-D-apiose/UDP-D-xylose synthase 2 OS Arabidopsis thaliana GN AXS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZUY6|AXS1_ARATH 2 387 + 386 Gaps:1 98.97 389 87.53 0.0 UDP-D-apiose/UDP-D-xylose synthase 1 OS Arabidopsis thaliana GN AXS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S9Z2|AXS_ORYSJ 4 387 + 384 Gaps:1 96.23 398 85.12 0.0 UDP-D-apiose/UDP-D-xylose synthase OS Oryza sativa subsp. japonica GN Os01g0969100 PE 2 SV 1
blastp_uniprot_sprot sp|Q6D2F1|ARNA_ERWCT 17 372 + 356 Gaps:33 49.78 673 39.10 3e-66 Bifunctional polymyxin resistance protein ArnA OS Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN arnA PE 3 SV 1
blastp_uniprot_sprot sp|B2TW38|ARNA_SHIB3 17 372 + 356 Gaps:29 63.69 526 38.21 1e-65 Putative bifunctional polymyxin resistance protein ArnA OS Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN arnA PE 5 SV 1
blastp_uniprot_sprot sp|A8GDR7|ARNA_SERP5 17 375 + 359 Gaps:27 51.21 660 38.46 2e-65 Bifunctional polymyxin resistance protein ArnA OS Serratia proteamaculans (strain 568) GN arnA PE 3 SV 1
blastp_uniprot_sprot sp|C6DAW5|ARNA_PECCP 17 372 + 356 Gaps:33 49.85 672 38.51 3e-65 Bifunctional polymyxin resistance protein ArnA OS Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN arnA PE 3 SV 1
blastp_uniprot_sprot sp|Q4ZSZ2|ARNA_PSEU2 10 379 + 370 Gaps:31 51.96 664 38.55 3e-65 Bifunctional polymyxin resistance protein ArnA OS Pseudomonas syringae pv. syringae (strain B728a) GN arnA PE 3 SV 1
blastp_uniprot_sprot sp|A8A2C2|ARNA_ECOHS 17 372 + 356 Gaps:29 50.76 660 38.51 3e-65 Bifunctional polymyxin resistance protein ArnA OS Escherichia coli O9:H4 (strain HS) GN arnA PE 3 SV 1
blastp_uniprot_sprot sp|A6TF98|ARNA_KLEP7 17 372 + 356 Gaps:27 50.68 661 37.31 3e-65 Bifunctional polymyxin resistance protein ArnA OS Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN arnA PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 11 387 377 PTHR10366:SF216 none none none
Gene3D 16 242 227 G3DSA:3.40.50.720 none none IPR016040
PANTHER 11 387 377 PTHR10366 none none none
SUPERFAMILY 16 370 355 SSF51735 none none none
Gene3D 243 360 118 G3DSA:3.90.25.10 none none none
Pfam 17 288 272 PF01370 none NAD dependent epimerase/dehydratase family IPR001509

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting