Protein : Qrob_P0310350.2 Q. robur
Protein Identifier  ? Qrob_P0310350.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K02998 - small subunit ribosomal protein SAe Gene Prediction Quality  validated
Protein length 

Sequence

Length: 299  
Kegg Orthology  K02998
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015935 small ribosomal subunit The smaller of the two subunits of a ribosome.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101292825 1 298 + 298 Gaps:10 99.67 305 75.66 5e-160 40S ribosomal protein SA-like
blastp_kegg lcl|pxb:103948588 4 298 + 295 Gaps:10 99.33 299 77.44 2e-156 40S ribosomal protein SA-like
blastp_kegg lcl|mdm:103454273 4 298 + 295 Gaps:10 99.33 299 77.78 3e-156 40S ribosomal protein SA-like
blastp_kegg lcl|pxb:103961380 1 298 + 298 Gaps:10 100.00 304 75.99 4e-156 40S ribosomal protein SA-like
blastp_kegg lcl|cam:101511450 4 298 + 295 Gaps:9 99.34 302 77.67 4e-156 40S ribosomal protein SA-like
blastp_kegg lcl|pxb:103927101 1 298 + 298 Gaps:10 100.00 304 75.99 4e-156 40S ribosomal protein SA-like
blastp_kegg lcl|pxb:103948603 4 298 + 295 Gaps:10 99.33 299 77.44 4e-156 40S ribosomal protein SA-like
blastp_kegg lcl|mdm:103435895 1 298 + 298 Gaps:9 99.67 304 75.91 6e-156 40S ribosomal protein SA-like
blastp_kegg lcl|cam:101507310 4 298 + 295 Gaps:7 99.33 300 76.85 3e-155 40S ribosomal protein SA-like
blastp_kegg lcl|mdm:103412154 1 298 + 298 Gaps:6 100.00 304 75.33 8e-155 40S ribosomal protein SA-like
blastp_pdb 3iz6_A 12 281 + 270 Gaps:2 89.18 305 78.68 1e-138 mol:protein length:305 40S ribosomal protein Sa (S2p)
blastp_pdb 3bch_A 1 219 + 219 none 86.56 253 63.01 4e-98 mol:protein length:253 40S ribosomal protein SA
blastp_pdb 2zkq_b 12 219 + 208 none 70.51 295 65.38 1e-97 mol:protein length:295 40S Ribosomal protein SA
blastp_pdb 3u5g_A 18 211 + 194 Gaps:1 77.38 252 56.92 9e-78 mol:protein length:252 40S ribosomal protein S0-A
blastp_pdb 3u5c_A 18 211 + 194 Gaps:1 77.38 252 56.92 9e-78 mol:protein length:252 40S ribosomal protein S0-A
blastp_pdb 3o30_A 18 211 + 194 Gaps:1 77.38 252 56.92 9e-78 mol:protein length:252 40S ribosomal protein S0-A
blastp_pdb 3o2z_A 18 211 + 194 Gaps:1 77.38 252 56.92 9e-78 mol:protein length:252 40S ribosomal protein S0-A
blastp_pdb 3izb_A 18 211 + 194 Gaps:1 77.38 252 56.92 9e-78 mol:protein length:252 40S ribosomal protein rpS0 (S2p)
blastp_pdb 3jyv_B 18 205 + 188 Gaps:1 97.93 193 56.61 8e-74 mol:protein length:193 40S ribosomal protein S0(A)
blastp_pdb 1s1h_B 20 202 + 183 Gaps:1 99.46 185 56.52 3e-72 mol:protein length:185 40S ribosomal protein S0-A
blastp_uniprot_sprot sp|O65751|RSSA_CICAR 4 298 + 295 Gaps:7 99.33 300 76.17 1e-155 40S ribosomal protein SA OS Cicer arietinum GN RAP40 PE 2 SV 1
blastp_uniprot_sprot sp|O80377|RSSA_DAUCA 6 270 + 265 Gaps:8 89.90 297 80.90 9e-151 40S ribosomal protein SA OS Daucus carota GN 179B PE 2 SV 1
blastp_uniprot_sprot sp|Q8H173|RSSA2_ARATH 2 298 + 297 Gaps:21 99.29 280 75.90 3e-149 40S ribosomal protein Sa-2 OS Arabidopsis thaliana GN RPSaB PE 2 SV 2
blastp_uniprot_sprot sp|A5BUU4|RSSA_VITVI 6 273 + 268 Gaps:10 89.10 312 79.14 3e-149 40S ribosomal protein SA OS Vitis vinifera GN GSVIVT00034021001 PE 3 SV 1
blastp_uniprot_sprot sp|O22518|RSSA_SOYBN 8 263 + 256 Gaps:6 83.23 310 88.37 5e-149 40S ribosomal protein SA OS Glycine max PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZSR8|RSSA_BRANA 11 286 + 276 Gaps:14 96.58 292 74.47 1e-147 40S ribosomal protein SA OS Brassica napus GN LRP PE 2 SV 1
blastp_uniprot_sprot sp|Q08682|RSSA1_ARATH 1 262 + 262 Gaps:8 85.91 298 78.91 2e-144 40S ribosomal protein Sa-1 OS Arabidopsis thaliana GN RPSaA PE 1 SV 3
blastp_uniprot_sprot sp|Q01CH5|RSSA_OSTTA 11 211 + 201 none 70.03 287 76.12 4e-112 40S ribosomal protein SA OS Ostreococcus tauri GN Ot03g03270 PE 3 SV 2
blastp_uniprot_sprot sp|A4RUK2|RSSA_OSTLU 11 211 + 201 none 69.31 290 75.12 6e-112 40S ribosomal protein SA OS Ostreococcus lucimarinus (strain CCE9901) GN OSTLU_12355 PE 3 SV 1
blastp_uniprot_sprot sp|A8IB25|RSSA_CHLRE 12 209 + 198 none 70.97 279 75.76 3e-110 40S ribosomal protein SA OS Chlamydomonas reinhardtii GN CHLREDRAFT_126059 PE 1 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 15 210 196 TIGR01012 none uS2_euk_arch: ribosomal protein uS2 IPR005707
PRINTS 161 175 15 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 140 151 12 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 98 115 18 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 49 58 10 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 19 37 19 PR00395 none Ribosomal protein S2 signature IPR001865
PRINTS 123 140 18 PR00395 none Ribosomal protein S2 signature IPR001865
Gene3D 34 219 186 G3DSA:3.40.50.10490 none none none
Hamap 6 254 249 MF_03015 none 40S ribosomal protein SA [rps-0]. IPR027498
Pfam 122 189 68 PF00318 none Ribosomal protein S2 IPR001865
Pfam 22 117 96 PF00318 none Ribosomal protein S2 IPR001865
SUPERFAMILY 14 204 191 SSF52313 none none IPR023591
ProSitePatterns 123 147 25 PS00963 none Ribosomal protein S2 signature 2. IPR018130
PANTHER 5 298 294 PTHR11489 none none IPR005707

0 Localization

0 Qtllist

0 Targeting