Protein : Qrob_P0307350.2 Q. robur
Protein Identifier  ? Qrob_P0307350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR12741:SF7 - gb def: ENSANGP00000009396 (Fragment) Code Enzyme  EC:2.4.1.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1780  
Kegg Orthology  K11000
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003843 1,3-beta-D-glucan synthase activity Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).
GO:0000148 1,3-beta-D-glucan synthase complex A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.
GO:0006075 (1->3)-beta-D-glucan biosynthetic process The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328450 15 1777 + 1763 Gaps:7 99.60 1769 85.02 0.0 callose synthase 12
blastp_kegg lcl|pxb:103934003 15 1777 + 1763 Gaps:8 99.55 1769 84.16 0.0 callose synthase 12-like
blastp_kegg lcl|cit:102610237 16 1777 + 1762 Gaps:9 99.21 1771 83.15 0.0 callose synthase 12-like
blastp_kegg lcl|rcu:RCOM_1174510 1 1776 + 1776 Gaps:15 100.00 1767 84.15 0.0 transferase transferring glycosyl groups putative (EC:2.4.1.34)
blastp_kegg lcl|cmo:103490530 25 1777 + 1753 Gaps:9 98.92 1767 83.87 0.0 callose synthase 12-like
blastp_kegg lcl|csv:101207331 27 1777 + 1751 Gaps:9 98.81 1767 84.08 0.0 callose synthase 12-like
blastp_kegg lcl|fve:101313825 20 1777 + 1758 Gaps:9 99.72 1758 83.46 0.0 callose synthase 12-like
blastp_kegg lcl|cam:101509534 11 1776 + 1766 Gaps:11 99.83 1766 83.44 0.0 callose synthase 12-like
blastp_kegg lcl|pxb:103948548 15 1776 + 1762 Gaps:7 99.55 1769 83.82 0.0 callose synthase 12-like
blastp_kegg lcl|pxb:103948534 15 1776 + 1762 Gaps:7 99.55 1769 83.76 0.0 callose synthase 12-like
blastp_uniprot_sprot sp|Q9ZT82|CALSC_ARATH 4 1777 + 1774 Gaps:31 99.61 1780 76.88 0.0 Callose synthase 12 OS Arabidopsis thaliana GN CALS12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9S9U0|CALSB_ARATH 15 1777 + 1763 Gaps:20 99.94 1768 69.27 0.0 Callose synthase 11 OS Arabidopsis thaliana GN CALS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q3B724|CALS5_ARATH 30 1777 + 1748 Gaps:91 90.22 1923 48.41 0.0 Callose synthase 5 OS Arabidopsis thaliana GN CALS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LXT9|CALS3_ARATH 30 1777 + 1748 Gaps:98 90.03 1955 47.44 0.0 Callose synthase 3 OS Arabidopsis thaliana GN CALS3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SL03|CALS2_ARATH 30 1777 + 1748 Gaps:97 90.21 1950 47.36 0.0 Callose synthase 2 OS Arabidopsis thaliana GN CALS2 PE 2 SV 3
blastp_uniprot_sprot sp|Q9AUE0|CALS1_ARATH 30 1777 + 1748 Gaps:95 90.21 1950 47.47 0.0 Callose synthase 1 OS Arabidopsis thaliana GN CALS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LYS6|CALS6_ARATH 31 1777 + 1747 Gaps:134 89.90 1921 46.67 0.0 Putative callose synthase 6 OS Arabidopsis thaliana GN CALS6 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SHJ3|CALS7_ARATH 31 1778 + 1748 Gaps:122 88.46 1958 46.25 0.0 Callose synthase 7 OS Arabidopsis thaliana GN CALS7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9SJM0|CALSA_ARATH 16 1777 + 1762 Gaps:100 89.50 1904 47.65 0.0 Callose synthase 10 OS Arabidopsis thaliana GN CALS10 PE 2 SV 5
blastp_uniprot_sprot sp|Q9LUD7|CALS8_ARATH 30 1777 + 1748 Gaps:145 89.63 1976 45.40 0.0 Putative callose synthase 8 OS Arabidopsis thaliana GN CALS8 PE 2 SV 2
rpsblast_cdd gnl|CDD|202219 881 1656 + 776 Gaps:91 99.88 818 33.05 0.0 pfam02364 Glucan_synthase 1 3-beta-glucan synthase component. This family consists of various 1 3-beta-glucan synthase components including Gls1 Gls2 and Gls3 from yeast. 1 3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1 3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1 3)-beta-D-glucosyl}(N) < > UDP + {(1 3)-beta-D-glucosyl}(N+1).
rpsblast_cdd gnl|CDD|206456 163 279 + 117 Gaps:4 100.00 113 50.44 3e-50 pfam14288 FKS1_dom1 1 3-beta-glucan synthase subunit FKS1 domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1 3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase pfam02364.
rpsblast_kog gnl|CDD|36134 30 1777 + 1748 Gaps:265 89.76 1679 51.29 0.0 KOG0916 KOG0916 KOG0916 1 3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis].

35 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1512 1516 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 566 1347 782 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1517 1539 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1492 1511 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 429 455 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 494 512 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 544 565 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1746 1779 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1706 1725 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1371 1491 121 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 456 493 38 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 409 428 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 164 277 114 PF14288 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase subunit FKS1, domain-1 IPR026899
Phobius 1594 1611 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 371 389 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1682 1686 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1058 1778 721 PTHR12741:SF7 none none none
Phobius 318 334 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 354 370 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1612 1622 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1726 1745 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 335 353 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 42 1023 982 PTHR12741:SF7 none none none
Pfam 883 1656 774 PF02364 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase component IPR003440
PANTHER 42 1023 982 PTHR12741 none none none
PANTHER 1058 1778 721 PTHR12741 none none none
Phobius 1657 1681 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1348 1370 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 390 408 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 513 543 31 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

11 Localization

Analysis Start End Length
TMHMM 1349 1371 22
TMHMM 1684 1706 22
TMHMM 1655 1677 22
TMHMM 494 512 18
TMHMM 546 568 22
TMHMM 1517 1539 22
TMHMM 390 412 22
TMHMM 1623 1645 22
TMHMM 1726 1748 22
TMHMM 1490 1512 22
TMHMM 433 455 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting