Protein : Qrob_P0307210.2 Q. robur
Protein Identifier  ? Qrob_P0307210.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K05289 - glycosylphosphatidylinositol transamidase Gene Prediction Quality  validated
Protein length 

Sequence

Length: 713  
Kegg Orthology  K05289
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0042765 GPI-anchor transamidase complex An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa002024mg 12 712 + 701 Gaps:7 97.39 727 76.13 0.0 hypothetical protein
blastp_kegg lcl|pmum:103329801 6 712 + 707 Gaps:7 99.72 716 75.35 0.0 glycosylphosphatidylinositol anchor attachment 1 protein
blastp_kegg lcl|tcc:TCM_016964 3 712 + 710 Gaps:14 99.30 717 72.33 0.0 GPI transamidase component family protein / Gaa1-like family protein
blastp_kegg lcl|pop:POPTR_0001s35320g 5 712 + 708 Gaps:8 99.72 716 69.75 0.0 POPTRDRAFT_1068899 GPI transamidase component family protein
blastp_kegg lcl|vvi:100245727 6 712 + 707 Gaps:21 99.86 701 73.00 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_kegg lcl|pxb:103926969 1 710 + 710 Gaps:14 99.72 714 73.46 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_kegg lcl|pxb:103965799 1 710 + 710 Gaps:14 99.72 714 72.19 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_kegg lcl|mdm:103442224 2 710 + 709 Gaps:14 99.30 714 73.20 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_kegg lcl|fve:101299324 5 712 + 708 Gaps:32 99.60 741 68.83 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_kegg lcl|gmx:100791836 1 712 + 712 Gaps:17 100.00 707 69.17 0.0 glycosylphosphatidylinositol anchor attachment 1 protein-like
blastp_uniprot_sprot sp|Q9WTK3|GPAA1_MOUSE 13 625 + 613 Gaps:121 85.35 621 32.08 6e-33 Glycosylphosphatidylinositol anchor attachment 1 protein OS Mus musculus GN Gpaa1 PE 1 SV 3
blastp_uniprot_sprot sp|O43292|GPAA1_HUMAN 13 625 + 613 Gaps:105 85.35 621 29.25 1e-28 Glycosylphosphatidylinositol anchor attachment 1 protein OS Homo sapiens GN GPAA1 PE 1 SV 3
blastp_uniprot_sprot sp|P39012|GAA1_YEAST 16 483 + 468 Gaps:133 60.42 614 33.15 2e-27 GPI transamidase component GAA1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GAA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9US48|GAA1_SCHPO 19 480 + 462 Gaps:89 65.92 581 30.03 1e-22 GPI transamidase component gaa1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN gaa1 PE 3 SV 1
rpsblast_cdd gnl|CDD|112909 150 704 + 555 Gaps:100 98.19 498 28.43 2e-42 pfam04114 Gaa1 Gaa1-like GPI transamidase component. GPI (glycosyl phosphatidyl inositol) transamidase is a multi-protein complex. Gpi16 Gpi8 and Gaa1 for a sub-complex of the GPI transamidase. GPI transamidase that adds glycosylphosphatidylinositols (GPIs) to newly synthesised proteins.
rpsblast_kog gnl|CDD|38774 13 711 + 699 Gaps:100 98.70 617 36.45 1e-117 KOG3566 KOG3566 KOG3566 Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification protein turnover chaperones].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 480 518 39 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 145 235 91 PTHR13304 "UniPathway:UPA00196";signature_desc=GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN none IPR007246
PANTHER 11 126 116 PTHR13304 "UniPathway:UPA00196";signature_desc=GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN none IPR007246
PANTHER 254 334 81 PTHR13304 "UniPathway:UPA00196";signature_desc=GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN none IPR007246
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 710 712 3 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 52 455 404 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 584 605 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 537 547 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 573 583 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PIRSF 5 712 708 PIRSF036762 "UniPathway:UPA00196" none IPR007246
Phobius 665 683 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 684 709 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 548 572 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 145 235 91 PTHR13304:SF0 none none none
PANTHER 11 126 116 PTHR13304:SF0 none none none
PANTHER 254 334 81 PTHR13304:SF0 none none none
PANTHER 361 712 352 PTHR13304:SF0 none none none
Phobius 519 536 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 606 610 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 21 51 31 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 642 664 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 611 630 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 631 641 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 361 712 352 PTHR13304 "UniPathway:UPA00196";signature_desc=GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN none IPR007246
Pfam 368 707 340 PF04114 "UniPathway:UPA00196" Gaa1-like, GPI transamidase component IPR007246
Pfam 150 322 173 PF04114 "UniPathway:UPA00196" Gaa1-like, GPI transamidase component IPR007246
Phobius 456 479 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 611 628 17
TMHMM 585 607 22
TMHMM 21 43 22
TMHMM 551 573 22
TMHMM 519 536 17
TMHMM 456 478 22
TMHMM 641 663 22
TMHMM 683 705 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting