Protein : Qrob_P0301920.2 Q. robur
Protein Identifier  ? Qrob_P0301920.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) PF00154 - recA bacterial DNA recombination protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 195  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0003697 single-stranded DNA binding Interacting selectively and non-covalently with single-stranded DNA.
GO:0009432 SOS response An error-prone process for repairing damaged microbial DNA.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101225728 1 70 + 70 none 28.34 247 65.71 2e-23 DNA repair protein recA homolog 2 mitochondrial-like
blastp_kegg lcl|csv:101206290 1 70 + 70 none 17.46 401 64.29 3e-22 DNA repair protein recA homolog 2 mitochondrial-like
blastp_kegg lcl|tcc:TCM_028130 1 170 + 170 Gaps:2 17.88 397 74.65 1e-21 DNA repair protein recA
blastp_kegg lcl|pper:PRUPE_ppa023825mg 1 169 + 169 Gaps:2 78.49 93 67.12 3e-21 hypothetical protein
blastp_kegg lcl|cmo:103502456 1 70 + 70 none 17.50 400 64.29 5e-21 DNA repair protein recA homolog 2 mitochondrial
blastp_kegg lcl|pmum:103342440 1 169 + 169 Gaps:2 18.77 389 68.49 8e-21 DNA repair protein recA homolog 2 mitochondrial
blastp_kegg lcl|fve:101294202 1 170 + 170 Gaps:2 18.59 382 69.01 2e-19 DNA repair protein recA homolog 2 mitochondrial-like
blastp_kegg lcl|mdm:103450639 1 170 + 170 Gaps:2 18.77 389 68.49 9e-19 DNA repair protein recA homolog 2 mitochondrial
blastp_kegg lcl|vvi:100248558 2 70 + 69 none 17.34 398 60.87 4e-18 DNA repair protein recA homolog 2 mitochondrial-like
blastp_kegg lcl|pop:POPTR_0006s04660g 1 170 + 170 Gaps:2 18.64 381 64.79 2e-16 hypothetical protein
blastp_uniprot_sprot sp|Q8RY99|RECAM_ARATH 2 69 + 68 none 17.48 389 58.82 3e-17 DNA repair protein recA homolog 2 mitochondrial OS Arabidopsis thaliana GN At3g10140 PE 2 SV 1
blastp_uniprot_sprot sp|Q0S1P9|RECA_RHOSR 2 90 + 89 Gaps:8 23.92 347 38.55 8e-06 Protein RecA OS Rhodococcus sp. (strain RHA1) GN recA PE 3 SV 1
blastp_uniprot_sprot sp|C1B381|RECA_RHOOB 2 65 + 64 Gaps:1 18.68 348 40.00 9e-06 Protein RecA OS Rhodococcus opacus (strain B4) GN recA PE 3 SV 1
blastp_uniprot_sprot sp|C0ZYM6|RECA_RHOE4 2 65 + 64 Gaps:1 18.84 345 40.00 9e-06 Protein RecA OS Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN recA PE 3 SV 1
rpsblast_cdd gnl|CDD|29984 1 69 + 69 Gaps:1 21.54 325 35.71 1e-10 cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination DNA repair and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange..
rpsblast_cdd gnl|CDD|181793 1 70 + 70 Gaps:1 20.34 349 33.80 8e-08 PRK09354 recA recombinase A Provisional.
rpsblast_cdd gnl|CDD|162659 2 70 + 69 Gaps:1 21.81 321 30.00 6e-07 TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones it is regulated by LexA via autocatalytic cleavage.
rpsblast_cdd gnl|CDD|143922 2 70 + 69 Gaps:1 21.74 322 31.43 7e-07 pfam00154 RecA recA bacterial DNA recombination protein. RecA is a DNA-dependent ATPase and functions in DNA repair systems. RecA protein catalyzes an ATP-dependent DNA strand-exchange reaction that is the central step in the repair of dsDNA breaks by homologous recombination.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 2 70 69 PF00154 none recA bacterial DNA recombination protein IPR013765
SUPERFAMILY 18 70 53 SSF54752 none none IPR023400
Gene3D 17 70 54 G3DSA:3.30.250.10 none none IPR023400

0 Localization

0 Qtllist

0 Targeting