Protein : Qrob_P0300440.2 Q. robur
Protein Identifier  ? Qrob_P0300440.2 Organism . Name  Quercus robur
Score  18.2 Score Type  egn
Protein Description  (M=6) K03028 - 26S proteasome regulatory subunit N1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 432  
Kegg Orthology  K03028
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0030234 enzyme regulator activity Binds to and modulates the activity of an enzyme.
GO:0000502 proteasome complex A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.
GO:0042176 regulation of protein catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328445 99 338 + 240 Gaps:17 85.38 301 80.93 7e-142 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_kegg lcl|cam:101498643 99 343 + 245 Gaps:23 30.25 886 81.34 1e-140 26S proteasome non-ATPase regulatory subunit 2 1A-like
blastp_kegg lcl|tcc:TCM_008190 99 342 + 244 Gaps:23 30.17 885 82.02 1e-139 26S proteasome regulatory subunit S2 1A isoform 1
blastp_kegg lcl|vvi:100255701 99 344 + 246 Gaps:23 30.22 890 79.93 8e-139 26S proteasome regulatory subunit N1-like
blastp_kegg lcl|cit:102617825 99 338 + 240 Gaps:17 28.84 891 82.10 5e-138 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_kegg lcl|mdm:103444431 99 343 + 245 Gaps:23 29.98 894 80.22 7e-138 26S proteasome non-ATPase regulatory subunit 2 homolog A
blastp_kegg lcl|cic:CICLE_v10014210mg 99 338 + 240 Gaps:17 28.84 891 82.10 9e-138 hypothetical protein
blastp_kegg lcl|mtr:MTR_4g078780 99 343 + 245 Gaps:23 30.25 886 79.85 2e-137 26S proteasome non-ATPase regulatory subunit
blastp_kegg lcl|gmx:100777078 99 338 + 240 Gaps:17 29.04 885 81.71 3e-137 26S proteasome non-ATPase regulatory subunit 2 homolog A-like
blastp_kegg lcl|pxb:103945447 99 343 + 245 Gaps:23 29.98 894 79.85 1e-136 26S proteasome non-ATPase regulatory subunit 2 homolog A
blastp_uniprot_sprot sp|Q9SIV2|PSD2A_ARATH 99 338 + 240 Gaps:17 28.84 891 77.82 3e-131 26S proteasome non-ATPase regulatory subunit 2 homolog A OS Arabidopsis thaliana GN RPN1A PE 1 SV 2
blastp_uniprot_sprot sp|Q6XJG8|PSD2B_ARATH 99 338 + 240 Gaps:17 28.84 891 75.49 3e-126 26S proteasome non-ATPase regulatory subunit 2 homolog B OS Arabidopsis thaliana GN RPN1B PE 1 SV 1
blastp_uniprot_sprot sp|Q13200|PSMD2_HUMAN 99 338 + 240 Gaps:20 28.19 908 48.05 2e-69 26S proteasome non-ATPase regulatory subunit 2 OS Homo sapiens GN PSMD2 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R9I6|PSMD2_PONAB 99 338 + 240 Gaps:20 28.19 908 47.66 3e-69 26S proteasome non-ATPase regulatory subunit 2 OS Pongo abelii GN PSMD2 PE 2 SV 1
blastp_uniprot_sprot sp|P56701|PSMD2_BOVIN 99 338 + 240 Gaps:20 28.19 908 47.66 8e-69 26S proteasome non-ATPase regulatory subunit 2 OS Bos taurus GN PSMD2 PE 1 SV 2
blastp_uniprot_sprot sp|Q4FZT9|PSMD2_RAT 99 338 + 240 Gaps:20 28.19 908 47.66 4e-68 26S proteasome non-ATPase regulatory subunit 2 OS Rattus norvegicus GN Psmd2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VDM4|PSMD2_MOUSE 99 338 + 240 Gaps:20 28.19 908 47.66 4e-68 26S proteasome non-ATPase regulatory subunit 2 OS Mus musculus GN Psmd2 PE 1 SV 1
blastp_uniprot_sprot sp|Q54BC6|PSMD2_DICDI 99 338 + 240 Gaps:19 28.78 893 44.75 3e-59 26S proteasome non-ATPase regulatory subunit 2 OS Dictyostelium discoideum GN psmD2 PE 1 SV 1
blastp_uniprot_sprot sp|P87048|RPN1_SCHPO 99 338 + 240 Gaps:17 28.84 891 46.30 8e-59 26S proteasome regulatory subunit rpn1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN rpn1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7S8R8|RPN1_NEUCR 99 338 + 240 Gaps:18 28.60 902 38.76 1e-48 26S proteasome regulatory subunit rpn-1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN rpn-1 PE 3 SV 2
rpsblast_cdd gnl|CDD|34713 99 337 + 239 Gaps:18 29.17 881 42.02 5e-57 COG5110 RPN1 26S proteasome regulatory complex component [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37216 99 338 + 240 Gaps:19 29.04 878 63.14 4e-97 KOG2005 KOG2005 KOG2005 26S proteasome regulatory complex subunit RPN1/PSMD2 [Posttranslational modification protein turnover chaperones].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 347 420 74 G3DSA:3.60.15.10 none none IPR001279
PANTHER 99 347 249 PTHR10943:SF1 none none IPR016643
PANTHER 99 347 249 PTHR10943 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting