Protein : Qrob_P0299800.2 Q. robur
Protein Identifier  ? Qrob_P0299800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR24423//PTHR24423:SF370 - TWO-COMPONENT SENSOR HISTIDINE KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.13.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 974  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0004871 signal transducer activity Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO:0000155 phosphorelay sensor kinase activity Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
GO:0000160 phosphorelay signal transduction system A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa019228mg 1 973 + 973 Gaps:63 99.50 1005 74.60 0.0 hypothetical protein
blastp_kegg lcl|pmum:103320675 1 973 + 973 Gaps:60 99.50 1008 73.98 0.0 histidine kinase 5
blastp_kegg lcl|vvi:100262281 1 972 + 972 Gaps:47 99.51 1012 73.19 0.0 histidine kinase 5-like
blastp_kegg lcl|pxb:103949667 2 973 + 972 Gaps:52 99.41 1024 70.14 0.0 histidine kinase 5-like
blastp_kegg lcl|cic:CICLE_v10010162mg 1 973 + 973 Gaps:63 99.60 1002 71.64 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s03320g 1 973 + 973 Gaps:51 99.60 1012 70.04 0.0 POPTRDRAFT_261596 hypothetical protein
blastp_kegg lcl|pxb:103953077 1 973 + 973 Gaps:53 99.51 1023 69.35 0.0 histidine kinase 5-like
blastp_kegg lcl|mdm:103455750 1 973 + 973 Gaps:60 99.51 1018 69.30 0.0 histidine kinase 5
blastp_kegg lcl|pvu:PHAVU_001G043600g 1 972 + 972 Gaps:69 99.50 1000 69.75 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_009G084900g 1 972 + 972 Gaps:62 99.90 1003 69.36 0.0 hypothetical protein
blastp_pdb 3c97_A 819 966 + 148 Gaps:30 84.29 140 38.14 7e-14 mol:protein length:140 Signal transduction histidine kinase
blastp_pdb 2ayx_A 827 971 + 145 Gaps:32 44.49 254 40.71 1e-13 mol:protein length:254 Sensor kinase protein rcsC
blastp_pdb 2ayz_A 827 971 + 145 Gaps:32 84.96 133 40.71 2e-13 mol:protein length:133 Sensor kinase protein rcsC
blastp_pdb 1ab5_B 826 970 + 145 Gaps:31 92.80 125 34.48 2e-08 mol:protein length:125 CHEY
blastp_pdb 1ab5_A 826 970 + 145 Gaps:31 92.80 125 34.48 2e-08 mol:protein length:125 CHEY
blastp_pdb 1dcf_A 826 972 + 147 Gaps:28 87.50 136 30.25 1e-07 mol:protein length:136 ETR1 PROTEIN
blastp_pdb 1ab6_B 826 970 + 145 Gaps:31 92.80 125 33.62 1e-07 mol:protein length:125 CHEMOTAXIS PROTEIN CHEY
blastp_pdb 1ab6_A 826 970 + 145 Gaps:31 92.80 125 33.62 1e-07 mol:protein length:125 CHEMOTAXIS PROTEIN CHEY
blastp_pdb 1udr_D 826 970 + 145 Gaps:31 89.92 129 33.62 3e-07 mol:protein length:129 CHEY PROTEIN
blastp_pdb 1udr_C 826 970 + 145 Gaps:31 89.92 129 33.62 3e-07 mol:protein length:129 CHEY PROTEIN
blastp_uniprot_sprot sp|Q3S4A7|AHK5_ARATH 1 972 + 972 Gaps:57 99.46 922 59.43 0.0 Histidine kinase 5 OS Arabidopsis thaliana GN AHK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q54YZ9|DHKJ_DICDI 347 972 + 626 Gaps:47 17.07 2062 39.77 7e-26 Hybrid signal transduction histidine kinase J OS Dictyostelium discoideum GN dhkJ PE 3 SV 2
blastp_uniprot_sprot sp|Q9C5U1|AHK3_ARATH 370 972 + 603 Gaps:52 39.19 1036 35.47 5e-25 Histidine kinase 3 OS Arabidopsis thaliana GN AHK3 PE 1 SV 1
blastp_uniprot_sprot sp|Q86CZ2|DHKK_DICDI 349 969 + 621 Gaps:30 25.23 1213 38.24 1e-23 Hybrid signal transduction histidine kinase K OS Dictyostelium discoideum GN dhkK PE 1 SV 1
blastp_uniprot_sprot sp|P58356|TORS_ECO57 338 503 + 166 Gaps:12 19.47 914 37.64 3e-23 Sensor protein TorS OS Escherichia coli O157:H7 GN torS PE 3 SV 1
blastp_uniprot_sprot sp|P0DMC6|RCSC_ECOLX 352 503 + 152 Gaps:2 16.23 949 38.96 3e-23 Sensor histidine kinase RcsC OS Escherichia coli GN rcsC PE 1 SV 1
blastp_uniprot_sprot sp|P0DMC5|RCSC_ECOLI 352 503 + 152 Gaps:2 16.23 949 38.96 3e-23 Sensor histidine kinase RcsC OS Escherichia coli (strain K12) GN rcsC PE 1 SV 1
blastp_uniprot_sprot sp|P48027|GACS_PSESY 320 971 + 652 Gaps:34 34.95 907 38.17 4e-23 Sensor protein GacS OS Pseudomonas syringae pv. syringae GN gacS PE 3 SV 1
blastp_uniprot_sprot sp|Q551X9|DHKF_DICDI 306 972 + 667 Gaps:29 30.39 1109 34.72 4e-23 Hybrid signal transduction histidine kinase F OS Dictyostelium discoideum GN dhkF PE 3 SV 1
blastp_uniprot_sprot sp|P58662|RCSC_SALTY 352 503 + 152 Gaps:2 16.24 948 38.96 5e-23 Sensor histidine kinase RcsC OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN rcsC PE 3 SV 1

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 184 205 22 Coil none none none
SMART 367 432 66 SM00388 none His Kinase A (phosphoacceptor) domain IPR003661
SUPERFAMILY 421 512 92 SSF55874 none none IPR003594
SUPERFAMILY 597 631 35 SSF55874 none none IPR003594
Pfam 369 432 64 PF00512 none His Kinase A (phospho-acceptor) domain IPR003661
Pfam 478 610 133 PF02518 none Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594
Gene3D 435 512 78 G3DSA:3.30.565.10 none none IPR003594
Gene3D 597 610 14 G3DSA:3.30.565.10 none none IPR003594
PANTHER 595 646 52 PTHR24423:SF370 none none none
SUPERFAMILY 367 432 66 SSF47384 none none IPR009082
Gene3D 824 972 149 G3DSA:3.40.50.2300 none none none
Coils 338 359 22 Coil none none none
SMART 478 633 156 SM00387 none Histidine kinase-like ATPases IPR003594
PANTHER 204 345 142 PTHR24423 none none none
PANTHER 1 137 137 PTHR24423 none none none
PANTHER 927 940 14 PTHR24423 none none none
PANTHER 717 899 183 PTHR24423 none none none
ProSiteProfiles 826 972 147 PS50110 "Reactome:REACT_14797" Response regulatory domain profile. IPR001789
Gene3D 367 428 62 G3DSA:1.10.287.130 none none IPR003661
PANTHER 363 512 150 PTHR24423 none none none
PANTHER 927 940 14 PTHR24423:SF370 none none none
Pfam 827 895 69 PF00072 "Reactome:REACT_14797" Response regulator receiver domain IPR001789
ProSiteProfiles 374 633 260 PS50109 "Reactome:REACT_1046" Histidine kinase domain profile. IPR005467
Gene3D 222 340 119 G3DSA:3.30.450.20 none none none
Coils 88 123 36 Coil none none none
PANTHER 595 646 52 PTHR24423 none none none
SMART 825 968 144 SM00448 "Reactome:REACT_14797" cheY-homologous receiver domain IPR001789
SUPERFAMILY 927 972 46 SSF52172 none none IPR011006
SUPERFAMILY 825 894 70 SSF52172 none none IPR011006
PANTHER 204 345 142 PTHR24423:SF370 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting