Protein : Qrob_P0298000.2 Q. robur
Protein Identifier  ? Qrob_P0298000.2 Organism . Name  Quercus robur
Score  94.1 Score Type  egn
Protein Description  (M=61) 3.6.3.44 - Xenobiotic-transporting ATPase. Code Enzyme  EC:3.6.3.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 581  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0042626 ATPase activity, coupled to transmembrane movement of substances Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa002672mg 25 580 + 556 Gaps:53 85.14 646 70.91 2e-169 hypothetical protein
blastp_kegg lcl|pmum:103330161 7 580 + 574 Gaps:61 81.87 684 70.18 1e-166 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|vvi:100247338 16 580 + 565 Gaps:43 84.95 658 66.01 4e-164 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|mdm:103404558 12 580 + 569 Gaps:43 84.90 682 66.84 5e-164 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|pxb:103965797 12 580 + 569 Gaps:51 84.90 682 67.01 7e-164 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|cit:102618671 8 580 + 573 Gaps:51 83.88 695 63.29 7e-164 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|pxb:103959729 12 580 + 569 Gaps:51 83.67 692 66.32 1e-160 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10014634mg 64 579 + 516 Gaps:39 84.99 613 66.79 1e-160 hypothetical protein
blastp_kegg lcl|vvi:100249410 54 580 + 527 Gaps:38 74.89 705 66.29 5e-155 ABC transporter B family member 26 chloroplastic-like
blastp_kegg lcl|tcc:TCM_016965 31 565 + 535 Gaps:44 80.83 678 64.96 5e-155 ABC transporter B family member 26
blastp_pdb 2yl4_A 274 576 + 303 Gaps:33 53.45 595 40.57 8e-63 mol:protein length:595 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 4aa3_A 274 576 + 303 Gaps:33 51.37 619 40.25 1e-61 mol:protein length:619 ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10
blastp_pdb 3g61_B 242 578 + 337 Gaps:71 52.80 1284 39.53 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g61_A 242 578 + 337 Gaps:71 52.80 1284 39.53 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_B 242 578 + 337 Gaps:71 52.80 1284 39.53 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g60_A 242 578 + 337 Gaps:71 52.80 1284 39.53 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_B 246 578 + 333 Gaps:71 52.49 1284 39.61 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3g5u_A 246 578 + 333 Gaps:71 52.49 1284 39.61 4e-61 mol:protein length:1284 Multidrug resistance protein 1a
blastp_pdb 3b60_D 314 575 + 262 Gaps:32 46.39 582 43.33 4e-58 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_pdb 3b60_C 314 575 + 262 Gaps:32 46.39 582 43.33 4e-58 mol:protein length:582 Lipid A export ATP-binding/permease protein m
blastp_uniprot_sprot sp|Q8RY46|AB26B_ARATH 66 579 + 514 Gaps:48 85.29 700 58.96 2e-147 ABC transporter B family member 26 chloroplastic OS Arabidopsis thaliana GN ABCB26 PE 1 SV 1
blastp_uniprot_sprot sp|Q9CXJ4|ABCB8_MOUSE 87 576 + 490 Gaps:144 82.85 717 34.01 1e-66 ATP-binding cassette sub-family B member 8 mitochondrial OS Mus musculus GN Abcb8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9JI39|ABCBA_MOUSE 274 576 + 303 Gaps:33 44.48 715 41.82 2e-65 ATP-binding cassette sub-family B member 10 mitochondrial OS Mus musculus GN Abcb10 PE 2 SV 1
blastp_uniprot_sprot sp|Q54W24|ABCB4_DICDI 274 571 + 298 Gaps:39 40.03 767 44.63 2e-64 ABC transporter B family member 4 OS Dictyostelium discoideum GN abcB4 PE 3 SV 1
blastp_uniprot_sprot sp|Q56A55|ABCB8_DANRE 274 575 + 302 Gaps:32 43.98 714 42.68 2e-63 ATP-binding cassette sub-family B member 8 mitochondrial OS Danio rerio GN abcb8 PE 2 SV 1
blastp_uniprot_sprot sp|P21449|MDR2_CRIGR 267 576 + 310 Gaps:64 45.85 1276 44.10 2e-62 Multidrug resistance protein 2 OS Cricetulus griseus GN PGY2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FNU2|AB25B_ORYSJ 157 575 + 419 Gaps:31 61.31 641 40.71 3e-62 ABC transporter B family member 25 OS Oryza sativa subsp. japonica GN OsABCB25 PE 2 SV 1
blastp_uniprot_sprot sp|P43245|MDR1_RAT 267 576 + 310 Gaps:60 43.46 1277 44.32 9e-62 Multidrug resistance protein 1 OS Rattus norvegicus GN Abcb1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9NRK6|ABCBA_HUMAN 274 576 + 303 Gaps:33 43.09 738 40.57 2e-61 ATP-binding cassette sub-family B member 10 mitochondrial OS Homo sapiens GN ABCB10 PE 1 SV 2
blastp_uniprot_sprot sp|P08183|MDR1_HUMAN 267 576 + 310 Gaps:57 43.98 1280 44.05 1e-60 Multidrug resistance protein 1 OS Homo sapiens GN ABCB1 PE 1 SV 3

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 323 574 252 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Phobius 137 155 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 369 568 200 G3DSA:3.40.50.300 none none IPR027417
Pfam 115 239 125 PF00664 none ABC transporter transmembrane region IPR011527
SUPERFAMILY 101 242 142 SSF90123 none none IPR011527
Gene3D 101 241 141 G3DSA:1.20.1560.10 none none none
Pfam 369 501 133 PF00005 none ABC transporter IPR003439
Phobius 184 580 397 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 113 136 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 347 575 229 SSF52540 none none IPR027417
SMART 364 551 188 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PANTHER 100 575 476 PTHR24221 none none none
Phobius 1 112 112 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 116 240 125 PS50929 none ABC transporter integral membrane type-1 fused domain profile. IPR011527
Phobius 156 183 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 473 487 15 PS00211 none ABC transporters family signature. IPR017871

2 Localization

Analysis Start End Length
TMHMM 157 179 22
TMHMM 114 136 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting