Protein : Qrob_P0292080.2 Q. robur
Protein Identifier  ? Qrob_P0292080.2 Organism . Name  Quercus robur
Score  81.6 Score Type  egn
Protein Description  (M=1) KOG0242//KOG4280 - Kinesin-like protein [Cytoskeleton]. // Kinesin-like protein [Cytoskeleton]. Code Enzyme  EC:3.6.4.4
Gene Prediction Quality  validated Protein length 

Sequence

Length: 201  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0003777 microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO:0007018 microtubule-based movement A microtubule-based process that is mediated by motor proteins and results in the movement of organelles, other microtubules, or other particles along microtubules.
GO:0008017 microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
GO:0005871 kinesin complex Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103937076 99 177 + 79 Gaps:1 8.62 928 76.25 1e-31 kinesin-like protein NACK1
blastp_kegg lcl|pper:PRUPE_ppa001038mg 102 177 + 76 Gaps:1 8.32 926 79.22 2e-31 hypothetical protein
blastp_kegg lcl|mdm:103445161 99 177 + 79 Gaps:1 8.61 929 75.00 9e-31 kinesin-like protein NACK1
blastp_kegg lcl|pxb:103966937 99 168 + 70 none 7.54 928 81.43 1e-30 kinesin-like protein NACK1
blastp_kegg lcl|cit:102607874 102 168 + 67 none 6.96 962 83.58 3e-30 kinesin-like protein NACK1-like
blastp_kegg lcl|cic:CICLE_v10027758mg 102 168 + 67 none 6.98 960 83.58 3e-30 hypothetical protein
blastp_kegg lcl|pda:103708497 102 180 + 79 Gaps:1 8.21 975 75.00 3e-30 kinesin-like protein NACK2
blastp_kegg lcl|csv:101230740 102 177 + 76 Gaps:1 8.28 930 79.22 4e-30 kinesin-like protein KIN12B-like
blastp_kegg lcl|csv:101213783 102 177 + 76 Gaps:1 8.28 930 79.22 4e-30 kinesin-like protein KIN12B-like
blastp_kegg lcl|rcu:RCOM_1450660 102 177 + 76 Gaps:1 9.14 842 77.92 9e-30 ATP binding protein putative
blastp_uniprot_sprot sp|Q8S905|NACK1_ARATH 104 184 + 81 Gaps:1 8.42 974 50.00 4e-17 Kinesin-like protein NACK1 OS Arabidopsis thaliana GN NACK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S949|NACK2_TOBAC 104 167 + 64 none 6.70 955 56.25 3e-15 Kinesin-like protein NACK2 OS Nicotiana tabacum GN NACK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S950|NACK1_TOBAC 104 184 + 81 Gaps:1 8.55 959 46.34 1e-14 Kinesin-like protein NACK1 OS Nicotiana tabacum GN NACK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LNZ2|NACK2_ARATH 103 166 + 64 none 6.82 938 60.94 2e-13 Kinesin-like protein NACK2 OS Arabidopsis thaliana GN NACK2 PE 1 SV 1
rpsblast_cdd gnl|CDD|30096 96 166 + 71 none 22.12 321 36.62 8e-18 cd01374 KISc_CENP_E Kinesin motor domain CENP-E/KIP2-like subgroup involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that kinesin head groups work in pairs. Upon replacing ADP with ATP a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also the neck linker binds to the motor domain which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer about 80 Angstroms along the microtubule. Meanwhile ATP hydrolysis takes place and when the second head domain binds to the microtubule the first domain again replaces ADP with ATP triggering a conformational change that pulls the first domain forward..
rpsblast_cdd gnl|CDD|201095 91 168 + 78 Gaps:2 24.54 326 31.25 8e-13 pfam00225 Kinesin Kinesin motor domain.
rpsblast_cdd gnl|CDD|197527 103 162 + 60 none 17.91 335 36.67 9e-11 smart00129 KISc Kinesin motor catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
rpsblast_cdd gnl|CDD|30092 98 162 + 65 none 19.23 338 40.00 1e-07 cd01370 KISc_KIP3_like Kinesin motor domain KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that kinesin head groups work in pairs. Upon replacing ADP with ATP a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also the neck linker binds to the motor domain which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer about 80 Angstroms along the microtubule. Meanwhile ATP hydrolysis takes place and when the second head domain binds to the microtubule the first domain again replaces ADP with ATP triggering a conformational change that pulls the first domain forward..
rpsblast_cdd gnl|CDD|30087 93 164 + 72 Gaps:3 21.07 356 29.33 2e-07 cd01365 KISc_KIF1A_KIF1B Kinesin motor domain KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain allowing KIF1A to move processively..
rpsblast_cdd gnl|CDD|30083 91 162 + 72 Gaps:2 22.56 328 36.49 5e-07 cd00106 KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins the motor domain is found at the N-terminus (N-type) in some its is found in the middle (M-type) or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors while C-type kinesins are (-) end-directed motors i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that kinesin head groups work in pairs. Upon replacing ADP with ATP a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also the neck linker binds to the motor domain which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer about 80 Angstroms along the microtubule. Meanwhile ATP hydrolysis takes place and when the second head domain binds to the microtubule the first domain again replaces ADP with ATP triggering a conformational change that pulls the first domain forward..
rpsblast_cdd gnl|CDD|30093 99 164 + 66 Gaps:1 20.12 333 34.33 5e-07 cd01371 KISc_KIF3 Kinesin motor domain kinesins II or KIF3_like proteins. Subgroup of kinesins which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport and have been implicated in neuronal transport melanosome transport the secretory pathway and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that kinesin head groups work in pairs. Upon replacing ADP with ATP a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also the neck linker binds to the motor domain which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer about 80 Angstroms along the microtubule. Meanwhile ATP hydrolysis takes place and when the second head domain binds to the microtubule the first domain again replaces ADP with ATP triggering a conformational change that pulls the first domain forward..
rpsblast_kog gnl|CDD|35463 96 166 + 71 none 10.52 675 42.25 3e-18 KOG0242 KOG0242 KOG0242 Kinesin-like protein [Cytoskeleton].
rpsblast_kog gnl|CDD|39481 101 163 + 63 Gaps:1 11.15 574 37.50 6e-07 KOG4280 KOG4280 KOG4280 Kinesin-like protein [Cytoskeleton].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1 200 200 PS50067 none Kinesin motor domain profile. IPR001752
Pfam 92 171 80 PF00225 none Kinesin motor domain IPR001752
PANTHER 102 166 65 PTHR24115:SF405 none none none
Gene3D 100 168 69 G3DSA:3.40.850.10 none none IPR001752
PANTHER 102 166 65 PTHR24115 none none IPR027640
SUPERFAMILY 99 171 73 SSF52540 none none IPR027417

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

0 Targeting