Protein : Qrob_P0292020.2 Q. robur
Protein Identifier  ? Qrob_P0292020.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K01583 - arginine decarboxylase [EC:4.1.1.19] Code Enzyme  EC:4.1.1.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 724  
Kegg Orthology  K01583
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008295 spermidine biosynthetic process The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.
GO:0006527 arginine catabolic process The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.
GO:0008792 arginine decarboxylase activity Catalysis of the reaction: L-arginine + H(+) = agmatine + CO(2).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100233080 1 723 + 723 Gaps:30 99.58 720 78.66 0.0 ADC arginine decarboxylase
blastp_kegg lcl|mdm:103422167 1 723 + 723 Gaps:24 99.59 730 76.62 0.0 arginine decarboxylase-like
blastp_kegg lcl|pxb:103966943 1 723 + 723 Gaps:20 99.59 730 76.07 0.0 arginine decarboxylase-like
blastp_kegg lcl|pper:PRUPE_ppa002034mg 1 723 + 723 Gaps:21 99.59 725 77.84 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_006773 1 723 + 723 Gaps:34 99.59 732 77.09 0.0 Arginine decarboxylase
blastp_kegg lcl|pop:POPTR_0004s17020g 1 717 + 717 Gaps:37 99.45 730 76.17 0.0 POPTRDRAFT_713160 arginine decarboxylase family protein
blastp_kegg lcl|cam:101497888 1 723 + 723 Gaps:38 99.59 732 74.07 0.0 arginine decarboxylase-like
blastp_kegg lcl|pmum:103335592 1 723 + 723 Gaps:26 99.59 726 77.32 0.0 arginine decarboxylase
blastp_kegg lcl|fve:101293515 1 721 + 721 Gaps:26 99.29 708 77.10 0.0 arginine decarboxylase-like
blastp_kegg lcl|cmo:103499728 1 723 + 723 Gaps:37 99.58 717 76.89 0.0 arginine decarboxylase
blastp_pdb 3nzq_B 52 649 + 598 Gaps:59 89.64 666 38.19 4e-119 mol:protein length:666 Biosynthetic arginine decarboxylase
blastp_pdb 3nzq_A 52 649 + 598 Gaps:59 89.64 666 38.19 4e-119 mol:protein length:666 Biosynthetic arginine decarboxylase
blastp_pdb 3n2o_D 52 604 + 553 Gaps:52 85.96 648 38.24 3e-109 mol:protein length:648 Biosynthetic arginine decarboxylase
blastp_pdb 3n2o_C 52 604 + 553 Gaps:52 85.96 648 38.24 3e-109 mol:protein length:648 Biosynthetic arginine decarboxylase
blastp_pdb 3n2o_B 52 604 + 553 Gaps:52 85.96 648 38.24 3e-109 mol:protein length:648 Biosynthetic arginine decarboxylase
blastp_pdb 3n2o_A 52 604 + 553 Gaps:52 85.96 648 38.24 3e-109 mol:protein length:648 Biosynthetic arginine decarboxylase
blastp_pdb 3nzp_B 52 641 + 590 Gaps:58 92.73 619 33.10 5e-87 mol:protein length:619 Arginine decarboxylase
blastp_pdb 3nzp_A 52 641 + 590 Gaps:58 92.73 619 33.10 5e-87 mol:protein length:619 Arginine decarboxylase
blastp_pdb 2p3e_B 108 342 + 235 Gaps:28 51.19 420 31.63 8e-11 mol:protein length:420 Diaminopimelate decarboxylase
blastp_pdb 2p3e_A 108 342 + 235 Gaps:28 51.19 420 31.63 8e-11 mol:protein length:420 Diaminopimelate decarboxylase
blastp_uniprot_sprot sp|Q43075|SPE1_PEA 1 720 + 720 Gaps:37 99.59 728 71.17 0.0 Arginine decarboxylase OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|Q9SI64|SPE1_ARATH 40 720 + 681 Gaps:27 95.44 702 76.12 0.0 Arginine decarboxylase 1 OS Arabidopsis thaliana GN SPE1 PE 2 SV 1
blastp_uniprot_sprot sp|O23141|SPE2_ARATH 4 700 + 697 Gaps:26 98.31 711 72.96 0.0 Arginine decarboxylase 2 OS Arabidopsis thaliana GN SPE2 PE 2 SV 1
blastp_uniprot_sprot sp|O82475|SPE1_BRAJU 43 720 + 678 Gaps:26 94.59 702 74.25 0.0 Arginine decarboxylase OS Brassica juncea GN ADC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39827|SPE1_SOYBN 1 674 + 674 Gaps:26 95.95 692 74.40 0.0 Arginine decarboxylase OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|Q96412|SPE1_DIACA 1 723 + 723 Gaps:23 99.59 725 67.87 0.0 Arginine decarboxylase OS Dianthus caryophyllus GN ADC PE 2 SV 1
blastp_uniprot_sprot sp|Q9SNN0|SPE1_ORYSJ 39 720 + 682 Gaps:29 93.30 702 68.85 0.0 Arginine decarboxylase 1 OS Oryza sativa subsp. japonica GN ADC1 PE 1 SV 1
blastp_uniprot_sprot sp|P49726|SPE1_SOLLC 107 610 + 504 Gaps:6 100.00 502 79.48 0.0 Arginine decarboxylase OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|O81160|SPE2_THECC 141 548 + 408 Gaps:8 100.00 406 76.11 0.0 Arginine decarboxylase (Fragment) OS Theobroma cacao GN SPE2 PE 3 SV 1
blastp_uniprot_sprot sp|Q7XRA1|ADC2_ORYSJ 50 672 + 623 Gaps:29 97.27 623 46.20 0.0 Arginine decarboxylase 2 OS Oryza sativa subsp. japonica GN ADC2 PE 1 SV 2

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 487 640 154 PTHR11482 none none none
TIGRFAM 43 672 630 TIGR01273 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" speA: arginine decarboxylase IPR002985
Pfam 484 600 117 PF00278 "Reactome:REACT_13" Pyridoxal-dependent decarboxylase, C-terminal sheet domain IPR022643
SUPERFAMILY 114 395 282 SSF51419 none none IPR029066
PANTHER 487 640 154 PTHR11482:SF36 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834";signature_desc=ARGININE DECARBOXYLASE 1-RELATED (PTHR11482:SF36) none IPR002985
ProSitePatterns 145 163 19 PS00878 "Reactome:REACT_13" Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. IPR022653
Gene3D 115 380 266 G3DSA:3.20.20.10 none none IPR029066
PANTHER 39 409 371 PTHR11482:SF36 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834";signature_desc=ARGININE DECARBOXYLASE 1-RELATED (PTHR11482:SF36) none IPR002985
Gene3D 490 604 115 G3DSA:2.40.37.10 "Reactome:REACT_13" none IPR009006
Gene3D 381 406 26 G3DSA:2.40.37.10 "Reactome:REACT_13" none IPR009006
Pfam 124 394 271 PF02784 "Reactome:REACT_13" Pyridoxal-dependent decarboxylase, pyridoxal binding domain IPR022644
ProSitePatterns 326 339 14 PS00879 "Reactome:REACT_13" Orn/DAP/Arg decarboxylases family 2 signature 2. IPR022657
PRINTS 245 267 23 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 373 390 18 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 579 600 22 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 195 210 16 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 113 128 16 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 499 520 22 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 524 549 26 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 221 242 22 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PRINTS 137 151 15 PR01180 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" Arginine decarboxylase signature IPR002985
PIRSF 32 675 644 PIRSF001336 "KEGG:00330+4.1.1.19","MetaCyc:PWY-40","MetaCyc:PWY-43","MetaCyc:PWY-6305","MetaCyc:PWY-6834" none IPR002985
PANTHER 39 409 371 PTHR11482 none none none
PRINTS 145 163 19 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 579 592 14 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 288 301 14 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 383 402 20 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183
PRINTS 169 181 13 PR01179 "Reactome:REACT_13" Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature IPR000183

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1

0 Targeting