Protein : Qrob_P0286150.2 Q. robur
Protein Identifier  ? Qrob_P0286150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11404:SF8 - SUPEROXIDE DISMUTASE [FE] Code Enzyme  EC:1.15.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 304  
Kegg Orthology  K04564
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004784 superoxide dismutase activity Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.
GO:0006801 superoxide metabolic process The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101314223 3 303 + 301 Gaps:10 97.80 318 70.74 9e-145 superoxide dismutase [Fe] chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1502890 5 303 + 299 Gaps:10 100.00 305 70.16 4e-144 superoxide dismutase [fe] putative (EC:1.15.1.1)
blastp_kegg lcl|pper:PRUPE_ppa008765mg 15 303 + 289 Gaps:10 93.73 319 77.26 4e-143 hypothetical protein
blastp_kegg lcl|pmum:103333005 15 303 + 289 Gaps:11 93.75 320 77.33 8e-141 superoxide dismutase [Fe] chloroplastic
blastp_kegg lcl|pxb:103953698 15 303 + 289 Gaps:11 93.75 320 75.33 1e-140 superoxide dismutase [Fe] chloroplastic
blastp_kegg lcl|vvi:100258067 15 303 + 289 Gaps:16 97.06 306 72.39 5e-140 superoxide dismutase [Fe] chloroplastic-like
blastp_kegg lcl|pxb:103952780 15 303 + 289 Gaps:10 93.73 319 75.92 2e-139 superoxide dismutase [Fe] chloroplastic-like
blastp_kegg lcl|pop:POPTR_0015s12190g 15 303 + 289 Gaps:15 95.77 307 72.79 3e-138 POPTRDRAFT_253123 hypothetical protein
blastp_kegg lcl|sly:101248277 5 303 + 299 Gaps:16 100.00 303 71.62 5e-138 superoxide dismutase [Fe] chloroplastic-like
blastp_kegg lcl|mdm:103428529 15 303 + 289 Gaps:11 93.75 320 73.67 2e-136 superoxide dismutase [Fe] chloroplastic-like
blastp_pdb 1unf_X 47 263 + 217 Gaps:9 94.96 238 73.89 2e-110 mol:protein length:238 IRON SUPEROXIDE DISMUTASE
blastp_pdb 1my6_B 59 261 + 203 Gaps:26 97.99 199 52.82 2e-60 mol:protein length:199 Iron (III) Superoxide Dismutase
blastp_pdb 1my6_A 59 261 + 203 Gaps:26 97.99 199 52.82 2e-60 mol:protein length:199 Iron (III) Superoxide Dismutase
blastp_pdb 3tqj_B 56 259 + 204 Gaps:30 90.48 210 51.05 3e-50 mol:protein length:210 Superoxide dismutase [Fe]
blastp_pdb 3tqj_A 56 259 + 204 Gaps:30 90.48 210 51.05 3e-50 mol:protein length:210 Superoxide dismutase [Fe]
blastp_pdb 1isc_B 56 258 + 203 Gaps:30 98.44 192 47.09 1e-47 mol:protein length:192 IRON(III) SUPEROXIDE DISMUTASE
blastp_pdb 1isc_A 56 258 + 203 Gaps:30 98.44 192 47.09 1e-47 mol:protein length:192 IRON(III) SUPEROXIDE DISMUTASE
blastp_pdb 1isb_B 56 258 + 203 Gaps:30 98.44 192 47.09 1e-47 mol:protein length:192 IRON(III) SUPEROXIDE DISMUTASE
blastp_pdb 1isb_A 56 258 + 203 Gaps:30 98.44 192 47.09 1e-47 mol:protein length:192 IRON(III) SUPEROXIDE DISMUTASE
blastp_pdb 1isa_B 56 258 + 203 Gaps:30 98.44 192 47.09 1e-47 mol:protein length:192 IRON(II) SUPEROXIDE DISMUTASE
blastp_uniprot_sprot sp|Q9LU64|SODF2_ARATH 29 303 + 275 Gaps:14 92.79 305 65.02 1e-128 Superoxide dismutase [Fe] 2 chloroplastic OS Arabidopsis thaliana GN FSD2 PE 1 SV 1
blastp_uniprot_sprot sp|P28759|SODF_SOYBN 47 266 + 220 Gaps:9 92.34 248 71.18 2e-106 Superoxide dismutase [Fe] chloroplastic OS Glycine max GN SODB PE 1 SV 1
blastp_uniprot_sprot sp|P22302|SODF_NICPL 55 263 + 209 Gaps:23 100.00 202 73.27 3e-100 Superoxide dismutase [Fe] chloroplastic (Fragment) OS Nicotiana plumbaginifolia GN SODB PE 2 SV 1
blastp_uniprot_sprot sp|P21276|SODF1_ARATH 48 263 + 216 Gaps:25 97.64 212 69.57 4e-89 Superoxide dismutase [Fe] 1 chloroplastic OS Arabidopsis thaliana GN FSD1 PE 1 SV 4
blastp_uniprot_sprot sp|Q5VRL3|SODF1_ORYSJ 56 281 + 226 Gaps:10 60.36 391 51.69 8e-78 Superoxide dismutase [Fe] 1 chloroplastic OS Oryza sativa subsp. japonica GN Os06g0115400 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FMX0|SODF3_ARATH 52 263 + 212 Gaps:24 78.33 263 55.83 2e-70 Superoxide dismutase [Fe] 3 chloroplastic OS Arabidopsis thaliana GN FSD3 PE 1 SV 1
blastp_uniprot_sprot sp|Q5VSB7|SODF2_ORYSJ 40 263 + 224 Gaps:23 85.10 255 46.08 6e-59 Superoxide dismutase [Fe] 2 chloroplastic OS Oryza sativa subsp. japonica GN Os06g0143000 PE 2 SV 1
blastp_uniprot_sprot sp|P77968|SODF_SYNY3 62 261 + 200 Gaps:25 95.98 199 51.31 1e-57 Superoxide dismutase [Fe] OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN sodB PE 1 SV 3
blastp_uniprot_sprot sp|P50061|SODF_LEPBY 60 258 + 199 Gaps:26 95.98 199 50.79 7e-57 Superoxide dismutase [Fe] OS Leptolyngbya boryana GN sodB PE 2 SV 1
blastp_uniprot_sprot sp|Q8YSZ1|SODF_NOSS1 59 257 + 199 Gaps:26 95.50 200 50.26 1e-55 Superoxide dismutase [Fe] OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN sodB PE 3 SV 3

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 28 303 276 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 57 273 217 PTHR11404 "MetaCyc:PWY-6854";signature_desc=SUPEROXIDE DISMUTASE 2 none IPR001189
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 57 273 217 PTHR11404:SF8 none none none
Pfam 57 140 84 PF00081 "MetaCyc:PWY-6854" Iron/manganese superoxide dismutases, alpha-hairpin domain IPR019831
Coils 260 281 22 Coil none none none
Pfam 204 257 54 PF02777 "MetaCyc:PWY-6854" Iron/manganese superoxide dismutases, C-terminal domain IPR019832
Pfam 145 198 54 PF02777 "MetaCyc:PWY-6854" Iron/manganese superoxide dismutases, C-terminal domain IPR019832
PRINTS 123 136 14 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 80 93 14 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 176 184 9 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 59 70 12 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
Phobius 21 27 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 73 140 68 G3DSA:1.10.287.990 none none none
SUPERFAMILY 142 261 120 SSF54719 "MetaCyc:PWY-6854" none IPR019832
SUPERFAMILY 52 141 90 SSF46609 "MetaCyc:PWY-6854" none IPR019831
Phobius 2 20 19 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 18 17

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 18   Secretory pathway 4 0.601 0.126 NON-PLANT 18