Protein : Qrob_P0286130.2 Q. robur
Protein Identifier  ? Qrob_P0286130.2 Organism . Name  Quercus robur
Score  46.1 Score Type  egn
Protein Description  (M=2) PF00656//PF06943 - Caspase domain // LSD1 zinc finger Gene Prediction Quality  validated
Protein length 

Sequence

Length: 366  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004197 cysteine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103333119 1 357 + 357 Gaps:19 94.41 358 80.18 0.0 metacaspase-1-like
blastp_kegg lcl|pper:PRUPE_ppa007699mg 1 357 + 357 Gaps:19 94.41 358 80.18 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1502860 2 358 + 357 Gaps:12 94.55 367 80.69 0.0 caspase putative
blastp_kegg lcl|mdm:103431647 2 357 + 356 Gaps:15 94.20 362 76.83 0.0 metacaspase-1-like
blastp_kegg lcl|mdm:103416103 2 357 + 356 Gaps:15 94.20 362 76.83 0.0 metacaspase-1-like
blastp_kegg lcl|vvi:100244240 1 357 + 357 Gaps:17 94.48 362 76.61 0.0 metacaspase-1-like
blastp_kegg lcl|cic:CICLE_v10031874mg 1 354 + 354 Gaps:12 93.51 370 74.86 0.0 hypothetical protein
blastp_kegg lcl|cit:102611228 1 354 + 354 Gaps:12 93.51 370 73.70 0.0 metacaspase-1-like
blastp_kegg lcl|mdm:103439570 1 357 + 357 Gaps:11 94.54 366 78.03 0.0 metacaspase-1-like
blastp_kegg lcl|sly:101247995 1 357 + 357 Gaps:18 94.46 361 75.95 0.0 metacaspase-1-like
blastp_pdb 4afv_A 15 326 + 312 Gaps:34 86.65 367 31.45 2e-35 mol:protein length:367 METACASPASE MCA2
blastp_pdb 4afr_A 15 326 + 312 Gaps:34 86.65 367 31.45 2e-35 mol:protein length:367 METACASPASE
blastp_pdb 4afp_A 15 326 + 312 Gaps:34 86.65 367 31.45 5e-35 mol:protein length:367 METACASPASE MCA2
blastp_pdb 4af8_A 15 326 + 312 Gaps:34 86.65 367 31.45 6e-35 mol:protein length:367 METACASPASE MCA2
blastp_pdb 3bij_C 93 285 + 193 Gaps:48 74.04 285 24.64 5e-09 mol:protein length:285 Uncharacterized protein GSU0716
blastp_pdb 3bij_B 93 285 + 193 Gaps:48 74.04 285 24.64 5e-09 mol:protein length:285 Uncharacterized protein GSU0716
blastp_pdb 3bij_A 93 285 + 193 Gaps:48 74.04 285 24.64 5e-09 mol:protein length:285 Uncharacterized protein GSU0716
blastp_uniprot_sprot sp|Q7XJE6|MCA1_ARATH 2 357 + 356 Gaps:25 91.28 367 73.73 6e-164 Metacaspase-1 OS Arabidopsis thaliana GN AMC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XJE5|MCA2_ARATH 1 334 + 334 Gaps:24 85.65 418 61.45 1e-148 Metacaspase-2 OS Arabidopsis thaliana GN AMC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FMG1|MCA3_ARATH 9 341 + 333 Gaps:6 90.88 362 48.63 1e-97 Metacaspase-3 OS Arabidopsis thaliana GN AMC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q75B43|MCA1_ASHGO 53 326 + 274 Gaps:46 69.03 452 36.86 8e-60 Metacaspase-1 OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q4PEQ5|MCA1_USTMA 42 325 + 284 Gaps:64 85.07 402 34.50 8e-57 Metacaspase-1 OS Ustilago maydis (strain 521 / FGSC 9021) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|O74477|MCA1_SCHPO 26 327 + 302 Gaps:49 79.76 425 34.51 2e-56 Metacaspase-1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pca1 PE 2 SV 1
blastp_uniprot_sprot sp|A3LSY7|MCA1_PICST 43 325 + 283 Gaps:47 78.91 403 36.48 1e-55 Metacaspase-1 OS Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN MCA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q7S4N5|MCA1B_NEUCR 88 326 + 239 Gaps:39 62.13 441 36.86 3e-55 Metacaspase-1B OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN mca-2 PE 3 SV 1
blastp_uniprot_sprot sp|A5D9W7|MCA1_PICGU 89 326 + 238 Gaps:40 66.83 410 37.96 5e-54 Metacaspase-1 OS Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN MCA1 PE 3 SV 2
blastp_uniprot_sprot sp|A7F075|MCA1_SCLS1 89 325 + 237 Gaps:39 62.96 432 35.66 1e-52 Metacaspase-1 OS Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN casA PE 3 SV 1
rpsblast_cdd gnl|CDD|201376 91 307 + 217 Gaps:31 81.58 228 29.57 5e-38 pfam00656 Peptidase_C14 Caspase domain.
rpsblast_kog gnl|CDD|36759 2 354 + 353 Gaps:45 93.37 362 45.86 1e-105 KOG1546 KOG1546 KOG1546 Metacaspase involved in regulation of apoptosis [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 89 328 240 G3DSA:3.40.50.1460 none none IPR029030
Pfam 6 30 25 PF06943 none LSD1 zinc finger IPR005735
PANTHER 47 326 280 PTHR31773 none none none
Pfam 91 325 235 PF00656 none Caspase domain IPR011600
SUPERFAMILY 42 47 6 SSF101447 none none none
TIGRFAM 3 33 31 TIGR01053 none LSD1: zinc finger domain, LSD1 subclass IPR005735

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting