Protein : Qrob_P0286090.2 Q. robur
Protein Identifier  ? Qrob_P0286090.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PF00579//PF01095 - tRNA synthetases class I (W and Y) // Pectinesterase Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 493  
Kegg Orthology  K01051
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007533mg 9 368 + 360 Gaps:3 99.18 364 63.16 4e-168 hypothetical protein
blastp_kegg lcl|pxb:103952831 9 369 + 361 Gaps:2 99.45 363 63.43 5e-168 putative pectinesterase 63
blastp_kegg lcl|mdm:103401623 1 368 + 368 Gaps:3 99.19 370 63.22 3e-167 putative pectinesterase 63
blastp_kegg lcl|pxb:103953814 9 368 + 360 Gaps:2 99.17 363 61.67 4e-166 putative pectinesterase 63
blastp_kegg lcl|pmum:103319434 1 368 + 368 Gaps:4 98.40 374 62.23 6e-166 pectinesterase PPME1-like
blastp_kegg lcl|pmum:103342367 1 368 + 368 Gaps:4 99.19 371 62.77 2e-165 putative pectinesterase 63
blastp_kegg lcl|pmum:103333124 1 368 + 368 Gaps:4 99.19 371 62.23 3e-165 putative pectinesterase 63
blastp_kegg lcl|pmum:103333126 1 368 + 368 Gaps:4 99.19 371 61.96 1e-164 putative pectinesterase 63
blastp_kegg lcl|pper:PRUPE_ppa015611mg 16 368 + 353 Gaps:2 99.16 356 62.89 1e-164 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007766mg 16 368 + 353 Gaps:2 99.16 356 62.89 1e-164 hypothetical protein
blastp_pdb 1xg2_A 78 363 + 286 Gaps:25 93.06 317 31.53 4e-40 mol:protein length:317 Pectinesterase 1
blastp_pdb 1gq8_A 73 363 + 291 Gaps:25 94.04 319 30.00 4e-37 mol:protein length:319 PECTINESTERASE
blastp_pdb 2ntq_B 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 72 351 + 280 Gaps:64 94.15 342 31.99 2e-25 mol:protein length:342 Pectinesterase A
blastp_pdb 1qjv_B 72 351 + 280 Gaps:64 94.15 342 31.99 3e-25 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 72 351 + 280 Gaps:64 94.15 342 31.99 3e-25 mol:protein length:342 PECTIN METHYLESTERASE
blastp_uniprot_sprot sp|Q9LY19|PME48_ARATH 20 367 + 348 Gaps:5 95.57 361 59.13 1e-148 Probable pectinesterase 48 OS Arabidopsis thaliana GN PME48 PE 2 SV 2
blastp_uniprot_sprot sp|Q84WM7|PPME1_ARATH 20 367 + 348 Gaps:5 95.57 361 59.13 2e-148 Pectinesterase PPME1 OS Arabidopsis thaliana GN PPME1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LY18|PME49_ARATH 14 367 + 354 Gaps:4 96.95 361 55.71 3e-137 Probable pectinesterase 49 OS Arabidopsis thaliana GN PME49 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKF3|PME63_ARATH 15 368 + 354 Gaps:31 97.34 338 59.88 3e-136 Putative pectinesterase 63 OS Arabidopsis thaliana GN PME63 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LY17|PME50_ARATH 9 367 + 359 Gaps:5 98.06 361 53.95 6e-136 Probable pectinesterase 50 OS Arabidopsis thaliana GN PME50 PE 2 SV 1
blastp_uniprot_sprot sp|D8VPP5|AL11A_OLEEU 6 370 + 365 Gaps:8 99.18 364 55.12 2e-129 Pectinesterase 1 OS Olea europaea PE 1 SV 1
blastp_uniprot_sprot sp|B2VPR8|AL11B_OLEEU 6 370 + 365 Gaps:8 99.18 364 55.12 6e-129 Pectinesterase 2 OS Olea europaea PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYZ3|PME53_ARATH 81 363 + 283 Gaps:11 75.20 383 45.83 3e-76 Probable pectinesterase 53 OS Arabidopsis thaliana GN PME53 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZQA4|PME14_ARATH 72 363 + 292 Gaps:3 87.99 333 40.96 6e-73 Putative pectinesterase 14 OS Arabidopsis thaliana GN PME14 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LPF3|PME68_ARATH 68 366 + 299 Gaps:12 84.25 362 40.00 3e-71 Probable pectinesterase 68 OS Arabidopsis thaliana GN PME68 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 370 489 120 SSF52374 none none none
Gene3D 371 489 119 G3DSA:3.40.50.620 none none IPR014729
Phobius 29 492 464 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 73 366 294 G3DSA:2.160.20.10 none none IPR012334
PANTHER 1 377 377 PTHR31321:SF8 none none none
ProSitePatterns 219 228 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
Pfam 74 359 286 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Phobius 22 28 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 73 365 293 SSF51126 none none IPR011050
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 398 488 91 PF00579 "Reactome:REACT_71" tRNA synthetases class I (W and Y) IPR002305
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 377 377 PTHR31321 none none none

4 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 28 27
SignalP_EUK 1 28 27
TMHMM 9 28 19
SignalP_GRAM_NEGATIVE 1 28 27

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.968 0.043 NON-PLANT 28