Protein : Qrob_P0280100.2 Q. robur
Protein Identifier  ? Qrob_P0280100.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=3) K04564 - superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Code Enzyme  EC:1.15.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 204  
Kegg Orthology  K04564
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004784 superoxide dismutase activity Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.
GO:0006801 superoxide metabolic process The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103497020 1 196 + 196 Gaps:4 85.11 235 81.00 9e-114 superoxide dismutase [Mn] mitochondrial-like
blastp_kegg lcl|tcc:TCM_045539 1 196 + 196 Gaps:4 86.96 230 80.00 3e-113 Superoxide dismutase
blastp_kegg lcl|pper:PRUPE_ppa010748mg 1 196 + 196 Gaps:11 87.34 237 76.81 1e-111 hypothetical protein
blastp_kegg lcl|pmum:103332881 1 196 + 196 Gaps:11 87.34 237 76.33 4e-111 superoxide dismutase [Mn] mitochondrial
blastp_kegg lcl|pda:103702122 1 196 + 196 Gaps:18 87.70 244 71.50 1e-109 superoxide dismutase [Mn] mitochondrial
blastp_kegg lcl|gmx:100101896 3 196 + 194 Gaps:2 81.33 241 76.02 2e-107 MnSOD
blastp_kegg lcl|gmx:100785490 3 196 + 194 Gaps:2 81.33 241 76.02 2e-107 superoxide dismutase [Mn] mitochondrial-like
blastp_kegg lcl|pvu:PHAVU_009G141600g 11 196 + 186 Gaps:1 78.24 239 80.21 2e-107 hypothetical protein
blastp_kegg lcl|sot:102584005 1 196 + 196 Gaps:2 86.84 228 74.75 4e-107 superoxide dismutase [Mn] mitochondrial-like
blastp_kegg lcl|vvi:100233137 1 196 + 196 Gaps:2 86.84 228 75.76 5e-107 MNSOD manganese superoxide dismutase
blastp_pdb 3dc6_C 27 196 + 170 Gaps:5 83.33 198 61.21 9e-62 mol:protein length:198 Superoxide dismutase [Mn] 1
blastp_pdb 3dc6_A 27 196 + 170 Gaps:5 83.33 198 61.21 9e-62 mol:protein length:198 Superoxide dismutase [Mn] 1
blastp_pdb 2adq_B 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn]
blastp_pdb 2adp_A 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn]
blastp_pdb 1xdc_B 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn] mitochondrial
blastp_pdb 1xdc_A 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn] mitochondrial
blastp_pdb 1msd_B 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 MANGANESE SUPEROXIDE DISMUTASE
blastp_pdb 1msd_A 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 MANGANESE SUPEROXIDE DISMUTASE
blastp_pdb 1luv_B 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn]
blastp_pdb 1luv_A 27 196 + 170 Gaps:4 83.84 198 56.63 7e-60 mol:protein length:198 Superoxide dismutase [Mn]
blastp_uniprot_sprot sp|P35017|SODM_HEVBR 1 196 + 196 Gaps:5 86.27 233 78.11 2e-111 Superoxide dismutase [Mn] mitochondrial OS Hevea brasiliensis GN SODA PE 2 SV 1
blastp_uniprot_sprot sp|Q9SM64|SODM_PRUPE 1 196 + 196 Gaps:2 86.84 228 76.77 4e-111 Superoxide dismutase [Mn] mitochondrial OS Prunus persica GN SOD PE 2 SV 1
blastp_uniprot_sprot sp|P11796|SODM_NICPL 1 196 + 196 Gaps:2 86.84 228 74.75 1e-109 Superoxide dismutase [Mn] mitochondrial OS Nicotiana plumbaginifolia GN SODA PE 1 SV 1
blastp_uniprot_sprot sp|O81235|SODM1_ARATH 1 196 + 196 Gaps:5 87.01 231 73.13 1e-105 Superoxide dismutase [Mn] 1 mitochondrial OS Arabidopsis thaliana GN MSD1 PE 1 SV 2
blastp_uniprot_sprot sp|P09233|SODM1_MAIZE 1 196 + 196 Gaps:9 87.23 235 69.27 3e-102 Superoxide dismutase [Mn] 3.1 mitochondrial OS Zea mays GN SODA.4 PE 2 SV 1
blastp_uniprot_sprot sp|P41980|SODM4_MAIZE 1 196 + 196 Gaps:9 87.12 233 71.43 4e-102 Superoxide dismutase [Mn] 3.4 mitochondrial OS Zea mays GN SODA.3 PE 2 SV 1
blastp_uniprot_sprot sp|O49066|SODM_CAPAN 1 196 + 196 Gaps:2 86.84 228 72.22 6e-102 Superoxide dismutase [Mn] mitochondrial OS Capsicum annuum GN SODA PE 2 SV 1
blastp_uniprot_sprot sp|P41979|SODM3_MAIZE 1 196 + 196 Gaps:7 87.12 233 69.95 6e-102 Superoxide dismutase [Mn] 3.3 mitochondrial OS Zea mays GN SODA.2 PE 2 SV 1
blastp_uniprot_sprot sp|Q43008|SODM_ORYSJ 1 196 + 196 Gaps:5 87.01 231 71.64 1e-101 Superoxide dismutase [Mn] mitochondrial OS Oryza sativa subsp. japonica GN SODA PE 2 SV 2
blastp_uniprot_sprot sp|P27084|SODM_PEA 1 196 + 196 Gaps:21 87.12 233 72.91 3e-99 Superoxide dismutase [Mn] mitochondrial OS Pisum sativum GN SODA PE 1 SV 2

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 59 80 22 Coil none none none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 25 106 82 PF00081 "MetaCyc:PWY-6854" Iron/manganese superoxide dismutases, alpha-hairpin domain IPR019831
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 10 17 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 110 196 87 SSF54719 "MetaCyc:PWY-6854" none IPR019832
Gene3D 43 106 64 G3DSA:1.10.287.990 none none none
SUPERFAMILY 24 107 84 SSF46609 "MetaCyc:PWY-6854" none IPR019831
PANTHER 10 196 187 PTHR11404:SF6 none none none
Pfam 116 197 82 PF02777 "MetaCyc:PWY-6854" Iron/manganese superoxide dismutases, C-terminal domain IPR019832
PIRSF 5 199 195 PIRSF000349 "MetaCyc:PWY-6854" none IPR001189
ProSitePatterns 187 194 8 PS00088 "MetaCyc:PWY-6854" Manganese and iron superoxide dismutases signature. IPR019833
Phobius 23 203 181 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 10 196 187 PTHR11404 "MetaCyc:PWY-6854";signature_desc=SUPEROXIDE DISMUTASE 2 none IPR001189
PRINTS 145 153 9 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 89 102 14 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 185 197 13 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 29 40 12 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
PRINTS 50 63 14 PR01703 "MetaCyc:PWY-6854" Manganese superoxide dismutase signature IPR001189
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Mitochondrion 3 0.043 0.774 NON-PLANT 30