Protein : Qrob_P0279390.2 Q. robur
Protein Identifier  ? Qrob_P0279390.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=3) K15188 - cyclin T Gene Prediction Quality  validated
Protein length 

Sequence

Length: 272  
Kegg Orthology  K15188
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101304762 1 267 + 267 Gaps:19 69.45 383 64.66 2e-108 cyclin-T1-4-like
blastp_kegg lcl|vvi:100249379 1 267 + 267 Gaps:29 67.77 363 68.70 3e-103 cyclin-T1-4-like
blastp_kegg lcl|pop:POPTR_0008s14990g 1 267 + 267 Gaps:25 78.64 323 68.11 4e-103 POPTRDRAFT_766332 cyclin T1 family protein
blastp_kegg lcl|cmo:103491409 1 267 + 267 Gaps:12 68.88 376 59.85 1e-102 cyclin-T1-5-like
blastp_kegg lcl|pmum:103322792 1 267 + 267 Gaps:4 69.03 381 64.26 1e-101 cyclin-T1-4-like
blastp_kegg lcl|cit:102619049 1 266 + 266 Gaps:21 69.03 381 64.26 4e-101 cyclin-T1-4-like
blastp_kegg lcl|csv:101216477 1 267 + 267 Gaps:8 69.05 378 59.77 2e-100 cyclin-T1-4-like
blastp_kegg lcl|tcc:TCM_020578 1 267 + 267 Gaps:26 47.95 536 68.48 2e-100 Cyclin family protein isoform 1
blastp_kegg lcl|cic:CICLE_v10005160mg 1 267 + 267 Gaps:23 75.35 353 63.16 4e-100 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007554mg 1 267 + 267 Gaps:32 72.25 364 64.64 1e-99 hypothetical protein
blastp_pdb 2w2h_B 153 257 + 105 Gaps:1 39.39 264 39.42 7e-16 mol:protein length:264 CYCLIN-T1
blastp_pdb 2w2h_A 153 257 + 105 Gaps:1 39.39 264 39.42 7e-16 mol:protein length:264 CYCLIN-T1
blastp_pdb 3tni_B 153 257 + 105 Gaps:1 40.15 259 38.46 3e-15 mol:protein length:259 Cyclin-T1
blastp_pdb 3tnh_B 153 257 + 105 Gaps:1 40.15 259 38.46 3e-15 mol:protein length:259 Cyclin-T1
blastp_pdb 3mia_B 153 257 + 105 Gaps:1 39.10 266 38.46 3e-15 mol:protein length:266 Cyclin-T1
blastp_pdb 3mi9_B 153 257 + 105 Gaps:1 39.10 266 38.46 3e-15 mol:protein length:266 Cyclin-T1
blastp_pdb 2pk2_D 153 257 + 105 Gaps:1 29.05 358 38.46 1e-14 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_C 153 257 + 105 Gaps:1 29.05 358 38.46 1e-14 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_B 153 257 + 105 Gaps:1 29.05 358 38.46 1e-14 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_pdb 2pk2_A 153 257 + 105 Gaps:1 29.05 358 38.46 1e-14 mol:protein length:358 Cyclin-T1 Protein Tat
blastp_uniprot_sprot sp|Q2QQS5|CCT14_ORYSJ 153 257 + 105 none 19.34 543 61.90 8e-39 Cyclin-T1-4 OS Oryza sativa subsp. japonica GN CYCT1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2RAC5|CCT13_ORYSJ 153 264 + 112 none 22.86 490 58.04 9e-38 Cyclin-T1-3 OS Oryza sativa subsp. japonica GN CYCT1-3 PE 3 SV 2
blastp_uniprot_sprot sp|Q8GYM6|CCT14_ARATH 153 257 + 105 none 19.41 541 60.00 3e-37 Cyclin-T1-4 OS Arabidopsis thaliana GN CYCT1-4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKE6|CCT15_ARATH 144 257 + 114 Gaps:2 20.03 579 57.76 2e-36 Cyclin-T1-5 OS Arabidopsis thaliana GN CYCT1-5 PE 2 SV 2
blastp_uniprot_sprot sp|Q56YF8|CCT12_ARATH 144 259 + 116 Gaps:2 25.65 460 57.63 8e-35 Cyclin-T1-2 OS Arabidopsis thaliana GN CYCT1-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LBC0|CCT13_ARATH 140 257 + 118 Gaps:14 41.64 317 51.52 7e-34 Cyclin-T1-3 OS Arabidopsis thaliana GN CYCT1-3 PE 1 SV 2
blastp_uniprot_sprot sp|Q0E474|CCT11_ORYSJ 153 257 + 105 none 23.54 446 51.43 5e-32 Cyclin-T1-1 OS Oryza sativa subsp. japonica GN CYCT1-1 PE 3 SV 2
blastp_uniprot_sprot sp|Q6Z7H3|CCT12_ORYSJ 153 257 + 105 none 16.67 630 45.71 4e-26 Cyclin-T1-2 OS Oryza sativa subsp. japonica GN CYCT1_2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C8P7|CCT11_ARATH 155 257 + 103 none 41.70 247 45.63 1e-21 Putative cyclin-T1-1 OS Arabidopsis thaliana GN CYCT1-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9QWV9|CCNT1_MOUSE 153 257 + 105 Gaps:1 14.36 724 39.42 3e-16 Cyclin-T1 OS Mus musculus GN Ccnt1 PE 1 SV 3

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 184 266 83 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
Gene3D 153 253 101 G3DSA:1.10.472.10 none none IPR013763
Pfam 153 259 107 PF00134 none Cyclin, N-terminal domain IPR006671
SUPERFAMILY 152 258 107 SSF47954 none none IPR013763
PANTHER 153 254 102 PTHR10026 none none IPR015429

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting