Protein : Qrob_P0275680.2 Q. robur
Protein Identifier  ? Qrob_P0275680.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=2) PTHR10809//PTHR10809:SF45 - VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED (PTHR10809:SF45) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 319  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103322919 1 232 + 232 Gaps:19 70.31 357 67.33 3e-106 vesicle-associated protein 2-2-like
blastp_kegg lcl|tcc:TCM_021123 1 232 + 232 Gaps:19 79.94 314 65.34 3e-104 Vesicle-associated membrane protein putative isoform 1
blastp_kegg lcl|gmx:100801987 1 232 + 232 none 78.64 295 65.95 3e-103 vesicle-associated protein 2-2-like
blastp_kegg lcl|rcu:RCOM_0679660 1 237 + 237 Gaps:3 77.63 304 63.98 3e-101 vesicle-associated membrane protein putative
blastp_kegg lcl|mtr:MTR_4g118760 1 246 + 246 none 80.39 306 62.20 5e-101 Vesicle-associated membrane protein-associated protein SCS2
blastp_kegg lcl|gmx:100794670 1 231 + 231 none 78.31 295 64.94 5e-101 vesicle-associated protein 2-2-like
blastp_kegg lcl|vvi:100247810 4 232 + 229 none 78.16 293 66.81 1e-100 vesicle-associated protein 2-2-like
blastp_kegg lcl|fve:101292886 1 232 + 232 Gaps:11 77.54 285 67.87 1e-94 vesicle-associated protein 2-2-like
blastp_kegg lcl|cit:102615081 1 232 + 232 Gaps:55 80.39 357 56.79 2e-93 vesicle-associated protein 2-2-like
blastp_kegg lcl|cic:CICLE_v10005219mg 1 232 + 232 Gaps:55 85.42 336 56.79 7e-93 hypothetical protein
blastp_pdb 3ikk_B 4 124 + 121 Gaps:11 92.91 127 36.44 2e-14 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 3ikk_A 4 124 + 121 Gaps:11 92.91 127 36.44 2e-14 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 2rr3_A 10 127 + 118 Gaps:10 87.69 130 36.84 9e-14 mol:protein length:130 Vesicle-associated membrane protein-associate
blastp_pdb 2cri_A 10 127 + 118 Gaps:4 77.55 147 33.33 2e-12 mol:protein length:147 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_F 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_E 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_D 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_C 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_B 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_A 10 94 + 85 Gaps:1 65.62 128 40.48 3e-12 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_uniprot_sprot sp|B9DHD7|VAP22_ARATH 1 206 + 206 Gaps:16 55.96 386 50.46 6e-56 Vesicle-associated protein 2-2 OS Arabidopsis thaliana GN PVA22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHC8|VAP12_ARATH 1 132 + 132 Gaps:2 56.07 239 58.21 4e-48 Vesicle-associated protein 1-2 OS Arabidopsis thaliana GN PVA12 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VZ95|VAP11_ARATH 2 132 + 131 Gaps:2 51.95 256 55.64 7e-45 Vesicle-associated protein 1-1 OS Arabidopsis thaliana GN PVA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q84WW5|VAP13_ARATH 4 132 + 129 Gaps:2 54.81 239 56.49 2e-43 Vesicle-associated protein 1-3 OS Arabidopsis thaliana GN PVA13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVU1|VAP21_ARATH 4 127 + 124 none 56.36 220 57.26 3e-42 Vesicle-associated protein 2-1 OS Arabidopsis thaliana GN PVA21 PE 2 SV 1
blastp_uniprot_sprot sp|O82213|VAP31_ARATH 2 122 + 121 none 81.21 149 54.55 1e-36 Vesicle-associated protein 3-1 OS Arabidopsis thaliana GN PVA31 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 1 132 + 132 Gaps:3 46.06 571 46.39 2e-33 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|P40075|SCS2_YEAST 6 128 + 123 Gaps:5 51.64 244 37.30 3e-15 Vesicle-associated membrane protein-associated protein SCS2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SCS2 PE 1 SV 3
blastp_uniprot_sprot sp|O60119|YH75_SCHPO 27 129 + 103 Gaps:4 27.94 383 41.12 4e-15 Vesicle-associated membrane protein-associated protein C16G5.05c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC16G5.05c PE 1 SV 1
blastp_uniprot_sprot sp|Q9Z269|VAPB_RAT 4 127 + 124 Gaps:11 49.79 243 37.19 4e-14 Vesicle-associated membrane protein-associated protein B OS Rattus norvegicus GN Vapb PE 1 SV 3

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 176 232 57 PTHR10809:SF45 none none none
PANTHER 1 133 133 PTHR10809:SF45 none none none
PANTHER 176 232 57 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763
PANTHER 1 133 133 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763
Gene3D 3 122 120 G3DSA:2.60.40.360 none none IPR008962
ProSiteProfiles 5 125 121 PS50202 none Major sperm protein (MSP) domain profile. IPR000535
Pfam 6 110 105 PF00635 none MSP (Major sperm protein) domain IPR000535
SUPERFAMILY 4 133 130 SSF49354 none none IPR008962

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting