Protein : Qrob_P0275600.2 Q. robur
Protein Identifier  ? Qrob_P0275600.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 4.1.1.50 - Adenosylmethionine decarboxylase. Code Enzyme  EC:4.1.1.50
Gene Prediction Quality  validated Protein length 

Sequence

Length: 364  
Kegg Orthology  K01611
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004014 adenosylmethionine decarboxylase activity Catalysis of the reaction: S-adenosyl-L-methionine + H(+) = S-adenosylmethioninamine + CO(2).
GO:0006597 spermine biosynthetic process The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.
GO:0008295 spermidine biosynthetic process The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10013866mg 3 361 + 359 Gaps:1 99.17 361 77.93 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa007294mg 3 352 + 350 Gaps:9 95.45 374 76.47 0.0 hypothetical protein
blastp_kegg lcl|pxb:103962701 3 352 + 350 Gaps:9 95.45 374 76.75 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|mdm:103417089 3 352 + 350 Gaps:9 95.45 374 76.75 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|pmum:103329636 3 352 + 350 Gaps:9 83.80 426 76.19 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|tcc:TCM_019632 3 360 + 358 Gaps:1 85.61 417 74.23 0.0 S-adenosylmethionine decarboxylase proenzyme isoform 1
blastp_kegg lcl|mdm:103425910 3 352 + 350 Gaps:9 95.45 374 75.63 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|fve:101300649 3 352 + 350 Gaps:8 95.42 371 74.86 0.0 S-adenosylmethionine decarboxylase proenzyme-like isoform 1
blastp_kegg lcl|pop:POPTR_0017s14280g 3 352 + 350 Gaps:1 96.68 361 75.36 0.0 S-adenosylmethionine decarboxylase family protein
blastp_kegg lcl|rcu:RCOM_0596710 3 352 + 350 Gaps:3 96.66 359 76.37 0.0 s-adenosylmethionine decarboxylase putative (EC:4.1.1.50)
blastp_pdb 1mhm_A 73 351 + 279 Gaps:1 96.53 288 67.27 1e-129 mol:protein length:288 S-adenosylmethionine decarboxylase
blastp_pdb 1msv_B 11 297 + 287 Gaps:12 79.94 354 37.10 8e-42 mol:protein length:354 S-adenosylmethionine decarboxylase proenzyme
blastp_pdb 1msv_A 11 297 + 287 Gaps:12 79.94 354 37.10 8e-42 mol:protein length:354 S-adenosylmethionine decarboxylase proenzyme
blastp_pdb 1jl0_B 11 297 + 287 Gaps:12 84.73 334 37.46 2e-40 mol:protein length:334 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME
blastp_pdb 1jl0_A 11 297 + 287 Gaps:12 84.73 334 37.46 2e-40 mol:protein length:334 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME
blastp_pdb 1mhm_B 4 71 + 68 none 94.44 72 85.29 8e-34 mol:protein length:72 S-adenosylmethionine decarboxylase
blastp_pdb 3ep6_A 73 297 + 225 Gaps:12 85.00 260 36.65 1e-28 mol:protein length:260 S-adenosylmethionine decarboxylase alpha chai
blastp_pdb 3ep3_A 73 297 + 225 Gaps:12 85.00 260 36.65 1e-28 mol:protein length:260 S-adenosylmethionine decarboxylase alpha chai
blastp_pdb 1jen_C 73 297 + 225 Gaps:12 82.77 267 36.65 2e-28 mol:protein length:267 PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (
blastp_pdb 1jen_A 73 297 + 225 Gaps:12 82.77 267 36.65 2e-28 mol:protein length:267 PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (
blastp_uniprot_sprot sp|Q42679|DCAM_CATRO 3 359 + 357 Gaps:1 99.72 357 71.63 0.0 S-adenosylmethionine decarboxylase proenzyme OS Catharanthus roseus GN SAMDC PE 1 SV 1
blastp_uniprot_sprot sp|Q96471|DCAM_IPONI 3 363 + 361 Gaps:2 99.17 362 70.47 0.0 S-adenosylmethionine decarboxylase proenzyme OS Ipomoea nil GN SAMDC PE 3 SV 1
blastp_uniprot_sprot sp|Q9M6K1|DCAM_IPOBA 3 363 + 361 Gaps:2 99.17 362 70.47 0.0 S-adenosylmethionine decarboxylase proenzyme OS Ipomoea batatas GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|O04009|DCAM_TOBAC 2 351 + 350 Gaps:1 96.68 361 72.21 3e-178 S-adenosylmethionine decarboxylase proenzyme OS Nicotiana tabacum GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|O80402|DCAM_NICSY 3 351 + 349 Gaps:1 96.40 361 72.41 5e-178 S-adenosylmethionine decarboxylase proenzyme OS Nicotiana sylvestris GN SAMDC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q96555|DCAM_DATST 4 351 + 348 Gaps:1 95.86 362 71.18 2e-176 S-adenosylmethionine decarboxylase proenzyme OS Datura stramonium GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|Q04694|DCAM_SOLTU 4 351 + 348 Gaps:1 96.39 360 70.89 1e-175 S-adenosylmethionine decarboxylase proenzyme OS Solanum tuberosum GN SAMDC PE 1 SV 1
blastp_uniprot_sprot sp|Q38IY3|DCAM_SOLCI 4 351 + 348 Gaps:1 96.93 358 70.89 2e-174 S-adenosylmethionine decarboxylase proenzyme OS Solanum chilense GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|O65354|DCAM_HELAN 6 359 + 354 Gaps:8 99.72 361 68.33 1e-173 S-adenosylmethionine decarboxylase proenzyme OS Helianthus annuus GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|Q9AXE3|DCAM_DAUCA 6 351 + 346 Gaps:2 95.84 361 69.36 1e-173 S-adenosylmethionine decarboxylase proenzyme OS Daucus carota GN SAMDC PE 2 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 7 335 329 PF01536 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" Adenosylmethionine decarboxylase IPR001985
TIGRFAM 11 336 326 TIGR00535 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" SAM_DCase: S-adenosylmethionine decarboxylase proenzyme IPR018167
PANTHER 5 355 351 PTHR11570:SF0 none none none
Gene3D 7 338 332 G3DSA:3.60.90.10 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR016067
PIRSF 2 341 340 PIRSF001355 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR018167
SUPERFAMILY 14 327 314 SSF56276 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR016067
ProSitePatterns 66 76 11 PS01336 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" S-adenosylmethionine decarboxylase signature. IPR018166
PANTHER 5 355 351 PTHR11570 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331";signature_desc=S-ADENOSYLMETHIONINE DECARBOXYLASE none IPR001985

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting