Protein : Qrob_P0272860.2 Q. robur
Protein Identifier  ? Qrob_P0272860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PTHR10015//PTHR10015:SF146 - HEAT SHOCK TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 361  
Kegg Orthology  K09419
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s12640g 1 357 + 357 Gaps:23 98.90 364 82.78 0.0 POPTRDRAFT_412394 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1590070 1 360 + 360 Gaps:32 100.00 362 82.04 0.0 DNA binding protein putative
blastp_kegg lcl|cic:CICLE_v10001482mg 1 360 + 360 Gaps:31 100.00 383 77.55 0.0 hypothetical protein
blastp_kegg lcl|vvi:100259171 1 359 + 359 Gaps:16 99.45 363 80.06 0.0 heat stress transcription factor B-4-like
blastp_kegg lcl|cit:102606748 1 360 + 360 Gaps:42 100.00 384 77.34 0.0 heat stress transcription factor B-4-like
blastp_kegg lcl|tcc:TCM_033816 1 357 + 357 Gaps:26 98.89 361 81.79 0.0 Heat shock transcription factor B4
blastp_kegg lcl|cam:101514043 1 360 + 360 Gaps:33 100.00 375 76.27 0.0 heat stress transcription factor B-4-like
blastp_kegg lcl|gmx:100781389 1 360 + 360 Gaps:23 100.00 363 80.72 2e-180 heat stress transcription factor B-4-like
blastp_kegg lcl|pop:POPTR_0014s02700g 1 359 + 359 Gaps:36 99.43 349 82.42 5e-179 heat shock transcription factor HSF31 family protein
blastp_kegg lcl|gmx:100780813 1 360 + 360 Gaps:25 100.00 363 78.51 2e-177 heat stress transcription factor B-4-like
blastp_pdb 2ldu_A 21 117 + 97 Gaps:12 85.60 125 46.73 2e-21 mol:protein length:125 Heat shock factor protein 1
blastp_pdb 1hkt_A 21 114 + 94 Gaps:11 97.17 106 43.69 1e-20 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1hks_A 21 114 + 94 Gaps:11 97.17 106 43.69 1e-20 mol:protein length:106 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hts_B 24 98 + 75 Gaps:11 84.31 102 37.21 2e-13 mol:protein length:102 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 3hsf_A 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION FACTOR
blastp_pdb 2hts_A 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT-SHOCK TRANSCRIPTION FACTOR
blastp_pdb 1fym_B 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fym_A 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT SHOCK TRANSCRIPTION PROTEIN
blastp_pdb 1fyl_B 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_pdb 1fyl_A 24 98 + 75 Gaps:11 93.48 92 37.21 3e-13 mol:protein length:92 HEAT SHOCK FACTOR PROTEIN
blastp_uniprot_sprot sp|Q9C635|HSFB4_ARATH 1 356 + 356 Gaps:63 98.56 348 61.52 5e-114 Heat stress transcription factor B-4 OS Arabidopsis thaliana GN HSFB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHZ0|HFB4B_ORYSJ 1 225 + 225 Gaps:21 72.26 310 60.71 8e-81 Heat stress transcription factor B-4b OS Oryza sativa subsp. japonica GN HSFB4B PE 1 SV 1
blastp_uniprot_sprot sp|Q10KX8|HFB4D_ORYSJ 1 227 + 227 Gaps:20 75.74 305 58.87 6e-78 Heat stress transcription factor B-4d OS Oryza sativa subsp. japonica GN HSFB4D PE 3 SV 1
blastp_uniprot_sprot sp|Q67U94|HFB4C_ORYSJ 24 355 + 332 Gaps:65 89.09 394 47.58 2e-75 Heat stress transcription factor B-4c OS Oryza sativa subsp. japonica GN HSFB4C PE 3 SV 1
blastp_uniprot_sprot sp|Q6Z9R8|HFB4A_ORYSJ 25 227 + 203 Gaps:26 58.16 380 53.85 1e-67 Putative heat stress transcription factor B-4a OS Oryza sativa subsp. japonica GN HSFB4A PE 3 SV 1
blastp_uniprot_sprot sp|Q6Z9C8|HFB2B_ORYSJ 18 226 + 209 Gaps:14 52.05 390 52.71 8e-60 Heat stress transcription factor B-2b OS Oryza sativa subsp. japonica GN HSFB2B PE 2 SV 1
blastp_uniprot_sprot sp|P22335|HSF24_SOLPE 17 231 + 215 Gaps:35 64.45 301 54.64 2e-56 Heat shock factor protein HSF24 OS Solanum peruvianum GN HSF24 PE 2 SV 1
blastp_uniprot_sprot sp|Q96320|HSFB1_ARATH 17 227 + 211 Gaps:36 65.85 284 52.94 3e-52 Heat stress transcription factor B-1 OS Arabidopsis thaliana GN HSFB1 PE 2 SV 2
blastp_uniprot_sprot sp|Q7XRX3|HFB2A_ORYSJ 24 225 + 202 Gaps:19 60.00 305 50.27 4e-52 Heat stress transcription factor B-2a OS Oryza sativa subsp. japonica GN HSFB2A PE 2 SV 2
blastp_uniprot_sprot sp|Q9SCW4|HFB2A_ARATH 17 252 + 236 Gaps:35 71.91 299 47.44 4e-52 Heat stress transcription factor B-2a OS Arabidopsis thaliana GN HSFB2A PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 21 114 94 SM00415 none heat shock factor IPR000232
PANTHER 167 233 67 PTHR10015:SF146 none none IPR027709
PANTHER 19 139 121 PTHR10015:SF146 none none IPR027709
ProSitePatterns 64 88 25 PS00434 none HSF-type DNA-binding domain signature. IPR000232
PRINTS 76 88 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 63 75 13 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PRINTS 25 48 24 PR00056 none Heat shock factor (HSF) domain signature IPR000232
PANTHER 167 233 67 PTHR10015 none none IPR027725
PANTHER 19 139 121 PTHR10015 none none IPR027725
Gene3D 17 109 93 G3DSA:1.10.10.10 none none IPR011991
Pfam 25 117 93 PF00447 none HSF-type DNA-binding IPR000232
SUPERFAMILY 22 114 93 SSF46785 none none none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting