Protein : Qrob_P0272590.2 Q. robur
Protein Identifier  ? Qrob_P0272590.2 Organism . Name  Quercus robur
Score  45.8 Score Type  egn
Protein Description  (M=21) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED (PTHR11206:SF87) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
Kegg Orthology  K03327
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006855 drug transmembrane transport The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO:0015238 drug transmembrane transporter activity Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO:0015297 antiporter activity Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10008114mg 8 219 + 212 none 43.27 490 69.81 2e-104 hypothetical protein
blastp_kegg lcl|cit:102628882 8 219 + 212 none 42.06 504 69.81 3e-104 MATE efflux family protein 5-like
blastp_kegg lcl|cam:101506763 8 217 + 210 none 43.57 482 70.95 9e-104 MATE efflux family protein 7-like
blastp_kegg lcl|vvi:100252666 8 219 + 212 none 43.18 491 70.28 1e-101 MATE efflux family protein DTX1-like
blastp_kegg lcl|vvi:100257810 8 219 + 212 none 43.00 493 70.28 1e-101 MATE efflux family protein 6-like
blastp_kegg lcl|gmx:100776083 8 217 + 210 none 44.21 475 68.57 3e-101 MATE efflux family protein DTX1-like
blastp_kegg lcl|gmx:100794717 8 217 + 210 none 44.30 474 70.00 2e-100 MATE efflux family protein 5-like
blastp_kegg lcl|pvu:PHAVU_004G152500g 8 217 + 210 none 41.92 501 68.10 9e-100 hypothetical protein
blastp_kegg lcl|gmx:100792588 8 217 + 210 none 42.17 498 67.14 5e-99 MATE efflux family protein DTX1-like
blastp_kegg lcl|pop:POPTR_0012s04810g 8 217 + 210 none 42.00 500 66.19 7e-98 POPTRDRAFT_892254 hypothetical protein
blastp_pdb 3mku_B 8 201 + 194 Gaps:6 43.48 460 26.50 1e-07 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mku_A 8 201 + 194 Gaps:6 43.48 460 26.50 1e-07 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_B 8 201 + 194 Gaps:6 43.48 460 26.50 1e-07 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_pdb 3mkt_A 8 201 + 194 Gaps:6 43.48 460 26.50 1e-07 mol:protein length:460 Multi antimicrobial extrusion protein (Na(+)/
blastp_uniprot_sprot sp|Q9LUH2|ALF5_ARATH 8 217 + 210 none 44.03 477 41.43 1e-52 MATE efflux family protein ALF5 OS Arabidopsis thaliana GN ALF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUH3|LAL5_ARATH 9 223 + 215 none 45.84 469 42.33 3e-52 MATE efflux family protein LAL5 OS Arabidopsis thaliana GN LAL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA5|DTX1_ARATH 9 223 + 215 none 45.17 476 41.86 9e-51 MATE efflux family protein DTX1 OS Arabidopsis thaliana GN DTX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWF5|MATE9_ARATH 9 223 + 215 none 44.51 483 43.72 1e-50 MATE efflux family protein 9 OS Arabidopsis thaliana GN DTXL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA4|MATE5_ARATH 9 223 + 215 none 45.17 476 43.26 3e-50 MATE efflux family protein 5 OS Arabidopsis thaliana GN DTXL1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SIA1|MATE8_ARATH 9 223 + 215 none 45.07 477 44.19 3e-50 MATE efflux family protein 8 OS Arabidopsis thaliana GN DTXL4 PE 3 SV 2
blastp_uniprot_sprot sp|Q8GXM8|MATE7_ARATH 9 223 + 215 none 45.17 476 40.93 1e-48 MATE efflux family protein 7 OS Arabidopsis thaliana GN DTXL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIA3|MATE6_ARATH 9 219 + 211 none 44.33 476 42.65 3e-48 MATE efflux family protein 6 OS Arabidopsis thaliana GN DTXL2 PE 3 SV 2
blastp_uniprot_sprot sp|Q9LYT3|TT12_ARATH 8 217 + 210 none 41.42 507 37.62 6e-41 Protein TRANSPARENT TESTA 12 OS Arabidopsis thaliana GN TT12 PE 2 SV 1
blastp_uniprot_sprot sp|A4IIS8|S47A1_XENTR 9 205 + 197 Gaps:6 34.32 574 38.58 5e-33 Multidrug and toxin extrusion protein 1 OS Xenopus tropicalis GN slc47a1 PE 2 SV 1
rpsblast_cdd gnl|CDD|162043 1 217 + 217 Gaps:8 65.79 342 29.33 5e-30 TIGR00797 matE putative efflux protein MATE family. The Multi Antimicrobial Extrusion (MATE) Family (TC 2.A.66) The MATE family consists of probable efflux proteins including a functionally characterized multi drug efflux system from Vibrio parahaemolyticus a putative ethionine resistance protein of Saccharomyces cerevisiae and the functionally uncharacterized DNA damage-inducible protein F (DinF) of E. coli. These proteins have 12 probable TMS.
rpsblast_cdd gnl|CDD|190033 1 122 + 122 Gaps:1 76.40 161 27.64 4e-15 pfam01554 MatE MatE. The MatE domain.
rpsblast_cdd gnl|CDD|30880 1 203 + 203 Gaps:4 45.49 455 21.26 7e-13 COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
rpsblast_cdd gnl|CDD|179333 8 201 + 194 Gaps:15 44.08 456 25.37 4e-10 PRK01766 PRK01766 multidrug efflux protein Reviewed.
rpsblast_kog gnl|CDD|36561 8 217 + 210 Gaps:2 43.97 473 43.75 1e-49 KOG1347 KOG1347 KOG1347 Uncharacterized membrane protein predicted efflux pump [General function prediction only].

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 206 223 18 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 7 122 116 PF01554 "Reactome:REACT_15518","Reactome:REACT_20633" MatE IPR002528
Phobius 53 71 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 29 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 101 124 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 8 223 216 PTHR11206 none none none
Phobius 125 135 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 8 223 216 PTHR11206:SF87 none none none
Phobius 90 100 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 185 205 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 136 153 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 30 52 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 154 184 31 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 72 89 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 103 125 22
TMHMM 39 61 22
TMHMM 74 96 22
TMHMM 135 157 22
TMHMM 177 199 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 53   Secretory pathway 4 0.657 0.134 NON-PLANT 53