Protein : Qrob_P0270390.2 Q. robur
Protein Identifier  ? Qrob_P0270390.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K02992 - small subunit ribosomal protein S7 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 156  
Kegg Orthology  K02992
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015935 small ribosomal subunit The smaller of the two subunits of a ribosome.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:3989376 1 155 + 155 none 100.00 155 98.71 1e-107 rps7 GlmaCp079 30S ribosomal protein S7
blastp_kegg lcl|gmx:3989343 1 155 + 155 none 100.00 155 98.71 1e-107 rps7 GlmaCp065 30S ribosomal protein S7
blastp_kegg lcl|gmx:100306140 1 155 + 155 none 89.60 173 98.71 2e-107 uncharacterized LOC100306140
blastp_kegg lcl|tcc:ThcaC_p078 1 155 + 155 none 100.00 155 98.71 2e-107 rps7 ribosomal protein S7
blastp_kegg lcl|tcc:ThcaC_p065 1 155 + 155 none 100.00 155 98.71 2e-107 rps7 ribosomal protein S7
blastp_kegg lcl|eus:EUTSA_v10011843mg 1 155 + 155 none 100.00 155 98.71 2e-107 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_891290 1 155 + 155 none 100.00 155 98.71 2e-107 ribosomal protein S7
blastp_kegg lcl|aly:ARALYDRAFT_894063 1 155 + 155 none 100.00 155 98.71 2e-107 ribosomal protein S7
blastp_kegg lcl|ath:ArthCp088 1 155 + 155 none 100.00 155 98.71 2e-107 rps7 30S ribosomal protein S7
blastp_kegg lcl|ath:ArthCp069 1 155 + 155 none 100.00 155 98.71 2e-107 rps7 30S ribosomal protein S7
blastp_pdb 3bbn_G 1 155 + 155 none 100.00 155 96.13 2e-107 mol:protein length:155 Ribosomal Protein S7
blastp_pdb 4dhb_G 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S Ribosomal Protein S7
blastp_pdb 4dh9_G 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S Ribosomal Protein S7
blastp_pdb 4abr_G 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3zvo_G 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3uzm_J 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3uzl_J 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3uzi_J 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3uzg_J 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_pdb 3uz7_J 1 155 + 155 none 99.36 156 47.10 3e-47 mol:protein length:156 30S RIBOSOMAL PROTEIN S7
blastp_uniprot_sprot sp|B1NWJ5|RR7_MANES 1 155 + 155 none 100.00 155 99.35 3e-109 30S ribosomal protein S7 chloroplastic OS Manihot esculenta GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|Q49KT8|RR7_EUCGG 1 155 + 155 none 100.00 155 99.35 3e-109 30S ribosomal protein S7 chloroplastic OS Eucalyptus globulus subsp. globulus GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|P07135|RR7_SOYBN 1 155 + 155 none 100.00 155 98.71 4e-109 30S ribosomal protein S7 chloroplastic OS Glycine max GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|Q6EM99|RR7_EUOAL 1 155 + 155 none 100.00 155 98.71 6e-109 30S ribosomal protein S7 chloroplastic OS Euonymus alatus GN rps7 PE 3 SV 1
blastp_uniprot_sprot sp|A4QJX6|RR7_OLIPU 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Olimarabidopsis pumila GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|A4QLX9|RR7_NASOF 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Nasturtium officinale GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|A4QLP0|RR7_LOBMA 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Lobularia maritima GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|A4QLF2|RR7_LEPVR 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Lepidium virginicum GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|Q2L964|RR7_GOSHI 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Gossypium hirsutum GN rps7-A PE 3 SV 1
blastp_uniprot_sprot sp|A0ZZ80|RR7_GOSBA 1 155 + 155 none 100.00 155 98.71 9e-109 30S ribosomal protein S7 chloroplastic OS Gossypium barbadense GN rps7-A PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Hamap 1 155 155 MF_00480_B none 30S ribosomal protein S7 [rpsG]. IPR005717
TIGRFAM 3 155 153 TIGR01029 none rpsG_bact: ribosomal protein uS7 IPR005717
Pfam 1 149 149 PF00177 none Ribosomal protein S7p/S5e IPR023798
PIRSF 2 155 154 PIRSF002122 none none IPR000235
SUPERFAMILY 2 149 148 SSF47973 none none IPR023798
Gene3D 1 149 149 G3DSA:1.10.455.10 none none IPR023798
ProSitePatterns 20 46 27 PS00052 none Ribosomal protein S7 signature. IPR020606
PANTHER 1 155 155 PTHR11205 none none IPR000235

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting