Protein : Qrob_P0270030.2 Q. robur
Protein Identifier  ? Qrob_P0270030.2 Organism . Name  Quercus robur
Protein Description  (M=4) K01601 - ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Alias (in v1)  Qrob_P0802220.1
Code Enzyme  EC:4.1.1.39 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 483  
Kegg Orthology  K01601
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0015977 carbon fixation A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
GO:0016984 ribulose-bisphosphate carboxylase activity Catalysis of the reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103343922 1 482 + 482 none 99.79 483 96.68 0.0 ribulose bisphosphate carboxylase large chain
blastp_kegg lcl|atr:s00334p00013200 8 482 + 475 none 100.00 475 98.11 0.0 AMTR_s00334p00013200 hypothetical protein
blastp_kegg lcl|pvu:PhvuCp06 8 482 + 475 none 99.79 476 97.89 0.0 rbcL ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|rcu:RCOM_ORF00051 8 482 + 475 none 100.00 475 97.89 0.0 rbcL ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|pmum:18668039 8 482 + 475 none 100.00 475 97.68 0.0 rbcL CP95_p059 ribulose 1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|pper:PrpeC_p029 8 482 + 475 none 100.00 475 97.68 0.0 rbcL ribulose 1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|fve:10251527 8 482 + 475 none 100.00 475 97.26 0.0 rbcL FvH4_C0049 ribulose 1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_kegg lcl|vvi:4025045 8 482 + 475 none 100.00 475 97.05 0.0 rbcL ViviCp029 RuBisCO large subunit
blastp_kegg lcl|pop:Poptr_cp030 8 482 + 475 none 100.00 475 97.26 0.0 rbcL ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit (EC:4.1.1.39)
blastp_kegg lcl|cam:6797517 8 482 + 475 none 100.00 475 96.84 0.0 rbcL CiarC_p003 ribulose-1 5-bisphosphate carboxylase/oxygenase large subunit
blastp_pdb 1rxo_H 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rxo_E 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rxo_B 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rxo_L 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_V 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_R 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_O 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_K 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_H 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_pdb 1rcx_E 8 482 + 475 none 100.00 475 94.74 0.0 mol:protein length:475 RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
blastp_uniprot_sprot sp|P48690|RBL_CASSA 8 482 + 475 none 100.00 475 99.79 0.0 Ribulose bisphosphate carboxylase large chain OS Castanea sativa GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q01874|RBL_QUERU 8 482 + 475 none 100.00 475 99.58 0.0 Ribulose bisphosphate carboxylase large chain OS Quercus rubra GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q06024|RBL_CORCO 8 482 + 475 none 100.00 475 98.74 0.0 Ribulose bisphosphate carboxylase large chain OS Corylus cornuta GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|A6MM44|RBL_BUXMI 8 482 + 475 none 100.00 475 98.32 0.0 Ribulose bisphosphate carboxylase large chain OS Buxus microphylla GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q06021|RBL_ALNIN 8 482 + 475 none 100.00 475 98.74 0.0 Ribulose bisphosphate carboxylase large chain OS Alnus incana GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q06022|RBL_BETPA 8 482 + 475 none 100.00 475 98.53 0.0 Ribulose bisphosphate carboxylase large chain OS Betula papyrifera GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|P28441|RBL_PLAOC 8 482 + 475 none 100.00 475 98.53 0.0 Ribulose bisphosphate carboxylase large chain OS Platanus occidentalis GN rbcL PE 3 SV 2
blastp_uniprot_sprot sp|P48715|RBL_SINAL 8 480 + 473 none 100.00 473 98.31 0.0 Ribulose bisphosphate carboxylase large chain (Fragment) OS Sinapis alba GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|Q06023|RBL_CARCO 8 482 + 475 none 100.00 475 98.11 0.0 Ribulose bisphosphate carboxylase large chain OS Carpinus caroliniana GN rbcL PE 3 SV 1
blastp_uniprot_sprot sp|A4GG89|RBL_PHAVU 8 482 + 475 none 99.79 476 97.89 0.0 Ribulose bisphosphate carboxylase large chain OS Phaseolus vulgaris GN rbcL PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 28 153 126 PF02788 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain, N-terminal domain IPR017444
PANTHER 352 461 110 PTHR23321 none none none
PANTHER 4 257 254 PTHR23321 none none none
Hamap 16 482 467 MF_01338 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain [rbcL]. IPR020888
PANTHER 352 461 110 PTHR23321:SF28 none none none
PANTHER 4 257 254 PTHR23321:SF28 none none none
SUPERFAMILY 155 481 327 SSF51649 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR000685
SUPERFAMILY 16 156 141 SSF54966 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR017443
Pfam 161 469 309 PF00016 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain, catalytic domain IPR000685
Gene3D 156 469 314 G3DSA:3.20.20.110 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR000685
ProSitePatterns 203 211 9 PS00157 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" Ribulose bisphosphate carboxylase large chain active site. IPR020878
Gene3D 29 155 127 G3DSA:3.30.70.150 "KEGG:00630+4.1.1.39","KEGG:00710+4.1.1.39","MetaCyc:PWY-5532","MetaCyc:PWY-5723" none IPR017443

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting