Protein : Qrob_P0269900.2 Q. robur
Protein Identifier  ? Qrob_P0269900.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=9) 2.7.7.59 - [Protein-PII] uridylyltransferase. Code Enzyme  EC:2.7.7.59
Gene Prediction Quality  validated Protein length 

Sequence

Length: 473  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016597 amino acid binding Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa005796mg 1 472 + 472 Gaps:29 100.00 443 83.52 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1447090 1 472 + 472 Gaps:31 100.00 443 85.10 0.0 amino acid binding protein putative
blastp_kegg lcl|pxb:103936115 1 472 + 472 Gaps:29 100.00 443 84.65 0.0 uncharacterized LOC103936115
blastp_kegg lcl|pop:POPTR_0001s33460g 1 472 + 472 Gaps:35 100.00 441 85.03 0.0 POPTRDRAFT_839072 hypothetical protein
blastp_kegg lcl|mdm:103404170 1 472 + 472 Gaps:29 98.44 450 84.20 0.0 uncharacterized LOC103404170
blastp_kegg lcl|pxb:103966550 1 472 + 472 Gaps:29 100.00 443 83.97 0.0 uncharacterized LOC103966550
blastp_kegg lcl|pxb:103938500 1 472 + 472 Gaps:29 100.00 443 83.52 0.0 uncharacterized LOC103938500
blastp_kegg lcl|tcc:TCM_017260 1 472 + 472 Gaps:31 100.00 443 84.42 0.0 ACT domain repeat 6
blastp_kegg lcl|cit:102618393 1 472 + 472 Gaps:5 100.00 473 78.65 0.0 uncharacterized LOC102618393
blastp_kegg lcl|pmum:103330312 1 472 + 472 Gaps:51 100.00 465 79.57 0.0 uncharacterized LOC103330312
blastp_uniprot_sprot sp|Q2RNG2|GLND_RHORT 136 362 + 227 Gaps:31 22.22 936 28.37 2e-10 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|Q5FPT6|GLND_GLUOX 140 353 + 214 Gaps:24 20.02 949 26.32 3e-10 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Gluconobacter oxydans (strain 621H) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|Q89VX9|GLND_BRADU 142 226 + 85 Gaps:1 9.04 929 39.29 5e-08 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN glnD PE 3 SV 2
blastp_uniprot_sprot sp|A5ETJ9|GLND_BRASB 108 221 + 114 Gaps:1 12.14 931 33.63 6e-08 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|A4YKP3|GLND_BRASO 108 221 + 114 Gaps:1 12.14 931 33.63 1e-07 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Bradyrhizobium sp. (strain ORS278) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|Q1QRM1|GLND_NITHX 117 217 + 101 Gaps:4 11.06 931 34.95 6e-07 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Nitrobacter hamburgensis (strain X14 / DSM 10229) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|Q98C27|GLND_RHILO 142 219 + 78 Gaps:1 8.25 933 40.26 1e-06 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Rhizobium loti (strain MAFF303099) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|Q3SWE0|GLND_NITWN 142 221 + 80 Gaps:1 8.54 925 37.97 2e-06 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|P62223|GLND_RHOPA 142 221 + 80 Gaps:1 8.50 929 37.97 2e-06 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN glnD PE 3 SV 1
blastp_uniprot_sprot sp|B1JBR2|GLND_PSEPW 363 441 + 79 Gaps:2 8.78 900 39.24 4e-06 Bifunctional uridylyltransferase/uridylyl-removing enzyme OS Pseudomonas putida (strain W619) GN glnD PE 3 SV 1
rpsblast_cdd gnl|CDD|153169 282 356 + 75 none 100.00 75 62.67 4e-30 cd04897 ACT_ACR_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). This CD includes the third ACT domain of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins found only in Arabidopsis and Oryza as yet are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|153197 146 219 + 74 none 100.00 74 63.51 7e-28 cd04925 ACT_ACR_2 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). This CD includes the second ACT domain of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins found only in Arabidopsis and Oryza as yet are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|153198 360 431 + 72 none 100.00 72 62.50 1e-27 cd04926 ACT_ACR_4 C-terminal ACT domain of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). This CD includes the C-terminal ACT domain of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins found only in Arabidopsis and Oryza as yet are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|153167 27 127 + 101 Gaps:29 100.00 72 58.33 9e-21 cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). This CD includes the N-terminal ACT domain of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein). ACR proteins found only in Arabidopsis and Oryza as yet are proposed to function as novel regulatory or sensor proteins in plants. Nine ACR gene products have been described (ACR1-8 in Arabidopsis and OsARC1-9 in Oryza) and are represented in this CD. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|153171 146 430 + 285 Gaps:2 100.00 70 61.43 9e-19 cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme GlnD and related domains. This ACT domain family ACT_ACR-UUR-like_2 includes the second of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme GlnD including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD are the second and fourth ACT domains of a novel protein composed almost entirely of ACT domain repeats the ACR protein. These ACR proteins found in Arabidopsis and Oryza are proposed to function as novel regulatory or sensor proteins in plants. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|153145 146 429 + 284 Gaps:3 100.00 70 68.57 7e-15 cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme GlnD. This ACT domain family ACT_UUR_ACR-like includes the two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme GlnD including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD are the four ACT domains of a novel protein composed almost entirely of ACT domain repeats (the ACR protein) and like proteins. These ACR proteins found in Arabidopsis and Oryza are proposed to function as novel regulatory or sensor proteins in plants. This CD also includes the first of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein and related domains as well as the N-terminal ACT domain of a yet characterized Arabidopsis/Oryza predicted tyrosine kinase. Members of this CD belong to the superfamily of ACT regulatory domains.
rpsblast_cdd gnl|CDD|179932 137 426 + 290 Gaps:91 21.80 931 44.33 1e-11 PRK05092 PRK05092 PII uridylyl-transferase Provisional.
rpsblast_cdd gnl|CDD|32672 139 431 + 293 Gaps:64 23.41 867 41.38 6e-10 COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|162491 15 354 + 340 Gaps:42 22.94 850 37.44 9e-09 TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase. This model describes GlnD the uridylyltransferase/uridylyl-removing enzyme for the nitrogen regulatory protein PII. Not all homologs of PII share the property of uridylyltransferase modification on the characteristic Tyr residue but the modification site is preserved in the PII homolog of all species with a member of this family.
rpsblast_cdd gnl|CDD|166881 363 441 + 79 Gaps:2 8.83 895 36.71 1e-08 PRK00275 glnD PII uridylyl-transferase Provisional.

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 85 103 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 359 427 69 SSF55021 none none none
PANTHER 2 70 69 PTHR31096:SF7 none none none
PANTHER 100 470 371 PTHR31096:SF7 none none none
Pfam 28 73 46 PF01842 none ACT domain IPR002912
Pfam 364 426 63 PF01842 none ACT domain IPR002912
Pfam 146 194 49 PF01842 none ACT domain IPR002912
Gene3D 141 215 75 G3DSA:3.30.70.260 none none none
Gene3D 360 426 67 G3DSA:3.30.70.260 none none none
PANTHER 2 70 69 PTHR31096 none none none
PANTHER 100 470 371 PTHR31096 none none none
Phobius 1 84 84 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 142 214 73 SSF55021 none none none
ProSiteProfiles 362 438 77 PS51671 none ACT domain profile. IPR002912
Phobius 104 472 369 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 24 69 46 SSF55021 none none none
ProSiteProfiles 29 97 69 PS51671 none ACT domain profile. IPR002912
ProSiteProfiles 147 228 82 PS51671 none ACT domain profile. IPR002912

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting