Protein : Qrob_P0268900.2 Q. robur
Protein Identifier  ? Qrob_P0268900.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 230  
Kegg Orthology  K07199
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0009744 response to sucrose Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.
GO:0043562 cellular response to nitrogen levels Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of inorganic nitrogen.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266800 10 229 + 220 none 76.92 286 80.45 2e-124 SNF1-related protein kinase regulatory subunit beta-1-like
blastp_kegg lcl|tcc:TCM_042037 10 229 + 220 none 68.75 320 77.27 4e-121 5\'-AMP-activated protein kinase beta-2 subunit protein isoform 1
blastp_kegg lcl|cam:101489487 10 229 + 220 none 78.85 279 77.27 4e-119 SNF1-related protein kinase regulatory subunit beta-1-like
blastp_kegg lcl|gmx:100793165 10 229 + 220 none 77.74 283 76.36 7e-119 SNF1-related protein kinase regulatory subunit beta-1-like
blastp_kegg lcl|gmx:100789052 10 229 + 220 none 77.46 284 76.82 7e-119 SNF1-related protein kinase regulatory subunit beta-1-like
blastp_kegg lcl|mtr:MTR_5g088270 10 229 + 220 none 79.71 276 75.00 5e-118 SNF1-related protein kinase regulatory beta subunit
blastp_kegg lcl|pvu:PHAVU_008G206100g 10 229 + 220 none 77.46 284 75.91 5e-117 hypothetical protein
blastp_kegg lcl|cmo:103492444 10 229 + 220 none 77.19 285 75.00 9e-117 SNF1-related protein kinase regulatory subunit beta-1
blastp_kegg lcl|csv:101202923 10 229 + 220 none 77.19 285 74.55 2e-116 BTB/POZ and MATH domain-containing protein 4-like
blastp_kegg lcl|cit:102619774 10 229 + 220 none 80.59 273 71.82 1e-113 SNF1-related protein kinase regulatory subunit beta-1-like
blastp_pdb 2f15_A 39 123 + 85 none 88.54 96 35.29 2e-14 mol:protein length:96 5'-AMP-activated protein kinase beta-2 subun
blastp_pdb 1z0m_C 36 123 + 88 Gaps:1 90.62 96 35.63 2e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 1z0m_B 36 123 + 88 Gaps:1 90.62 96 35.63 2e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 1z0m_A 36 123 + 88 Gaps:1 90.62 96 35.63 2e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 1z0n_C 36 123 + 88 Gaps:1 90.62 96 34.48 4e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 1z0n_B 36 123 + 88 Gaps:1 90.62 96 34.48 4e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 1z0n_A 36 123 + 88 Gaps:1 90.62 96 34.48 4e-12 mol:protein length:96 5'-AMP-activated protein kinase beta-1 subun
blastp_pdb 2qlv_E 45 146 + 102 Gaps:16 43.65 252 38.18 1e-08 mol:protein length:252 Protein SIP2
blastp_pdb 2qlv_B 45 146 + 102 Gaps:16 43.65 252 38.18 1e-08 mol:protein length:252 Protein SIP2
blastp_pdb 2ya3_B 153 227 + 75 Gaps:6 86.21 87 41.33 2e-08 mol:protein length:87 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-
blastp_uniprot_sprot sp|Q84VQ1|KINB1_ARATH 10 229 + 220 Gaps:2 77.03 283 70.64 8e-108 SNF1-related protein kinase regulatory subunit beta-1 OS Arabidopsis thaliana GN KINB1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SCY5|KINB2_ARATH 10 229 + 220 Gaps:4 77.51 289 50.89 5e-72 SNF1-related protein kinase regulatory subunit beta-2 OS Arabidopsis thaliana GN KINB2 PE 1 SV 1
blastp_uniprot_sprot sp|O43741|AAKB2_HUMAN 29 227 + 199 Gaps:20 77.57 272 33.65 1e-27 5'-AMP-activated protein kinase subunit beta-2 OS Homo sapiens GN PRKAB2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9QZH4|AAKB2_RAT 29 227 + 199 Gaps:20 77.86 271 33.65 1e-27 5'-AMP-activated protein kinase subunit beta-2 OS Rattus norvegicus GN Prkab2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6PAM0|AAKB2_MOUSE 29 227 + 199 Gaps:20 77.86 271 33.65 2e-27 5'-AMP-activated protein kinase subunit beta-2 OS Mus musculus GN Prkab2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R801|AAKB1_PONAB 29 227 + 199 Gaps:25 77.04 270 34.13 3e-25 5'-AMP-activated protein kinase subunit beta-1 OS Pongo abelii GN PRKAB1 PE 2 SV 3
blastp_uniprot_sprot sp|Q9Y478|AAKB1_HUMAN 29 227 + 199 Gaps:25 77.04 270 34.13 3e-25 5'-AMP-activated protein kinase subunit beta-1 OS Homo sapiens GN PRKAB1 PE 1 SV 4
blastp_uniprot_sprot sp|Q5BIS9|AAKB1_BOVIN 29 227 + 199 Gaps:23 77.04 270 33.17 6e-25 5'-AMP-activated protein kinase subunit beta-1 OS Bos taurus GN PRKAB1 PE 2 SV 3
blastp_uniprot_sprot sp|Q9R078|AAKB1_MOUSE 29 227 + 199 Gaps:23 77.04 270 32.69 7e-25 5'-AMP-activated protein kinase subunit beta-1 OS Mus musculus GN Prkab1 PE 1 SV 2
blastp_uniprot_sprot sp|P80386|AAKB1_RAT 29 227 + 199 Gaps:23 77.04 270 32.69 1e-24 5'-AMP-activated protein kinase subunit beta-1 OS Rattus norvegicus GN Prkab1 PE 1 SV 4

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 129 227 99 PF04739 "Reactome:REACT_11163","Reactome:REACT_498" 5'-AMP-activated protein kinase beta subunit, interation domain IPR006828
SMART 140 227 88 SM01010 "Reactome:REACT_11163","Reactome:REACT_498" 5'-AMP-activated protein kinase beta subunit, interation domain IPR006828
SUPERFAMILY 45 124 80 SSF81296 none none IPR014756
SUPERFAMILY 127 227 101 SSF160219 none none none
PANTHER 10 229 220 PTHR10343:SF51 none none IPR030067
PANTHER 10 229 220 PTHR10343 none none none

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 3 0.729 0.119 NON-PLANT 21