Protein : Qrob_P0265850.2 Q. robur
Protein Identifier  ? Qrob_P0265850.2 Organism . Name  Quercus robur
Score  6.0 Score Type  egn
Protein Description  (M=1) KOG0946//KOG2005 - ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking secretion and vesicular transport]. // 26S proteasome regulatory complex subunit RPN1/PSMD2 [Posttranslational modification protein turnover chaperones]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 314  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0048193 Golgi vesicle transport The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101308892 132 277 + 146 Gaps:14 17.56 911 79.38 1e-75 golgin candidate 6-like
blastp_kegg lcl|mdm:103432024 132 277 + 146 Gaps:14 17.62 908 78.12 8e-75 golgin candidate 6-like
blastp_kegg lcl|pmum:103344022 132 277 + 146 Gaps:14 34.86 459 76.25 2e-74 golgin candidate 6-like
blastp_kegg lcl|tcc:TCM_016988 132 277 + 146 Gaps:14 17.56 911 78.12 2e-74 Golgin candidate 6 isoform 1
blastp_kegg lcl|pxb:103960975 132 277 + 146 Gaps:14 17.62 908 78.12 3e-74 golgin candidate 6-like
blastp_kegg lcl|mdm:103442212 132 277 + 146 Gaps:14 17.62 908 77.50 1e-73 golgin candidate 6
blastp_kegg lcl|pxb:103959714 132 277 + 146 Gaps:14 17.62 908 77.50 2e-73 golgin candidate 6-like
blastp_kegg lcl|pmum:103329782 132 277 + 146 Gaps:14 17.52 913 76.88 1e-72 golgin candidate 6
blastp_kegg lcl|cmo:103498116 132 277 + 146 Gaps:14 17.56 911 77.50 1e-72 golgin candidate 6
blastp_kegg lcl|pper:PRUPE_ppa001083mg 132 277 + 146 Gaps:14 17.52 913 76.25 5e-71 hypothetical protein
blastp_pdb 3grl_A 132 184 + 53 none 8.14 651 60.38 3e-12 mol:protein length:651 General vesicular transport factor p115
blastp_pdb 3gq2_B 132 184 + 53 none 8.14 651 60.38 3e-12 mol:protein length:651 General vesicular transport factor p115
blastp_pdb 3gq2_A 132 184 + 53 none 8.14 651 60.38 3e-12 mol:protein length:651 General vesicular transport factor p115
blastp_pdb 2w3c_A 132 184 + 53 none 9.19 577 60.38 3e-12 mol:protein length:577 GENERAL VESICULAR TRANSPORT FACTOR P115
blastp_uniprot_sprot sp|B0F9L4|GOGC6_ARATH 132 277 + 146 Gaps:14 17.51 914 72.50 1e-68 Golgin candidate 6 OS Arabidopsis thaliana GN GC6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9Z1Z0|USO1_MOUSE 132 204 + 73 none 7.61 959 58.90 2e-18 General vesicular transport factor p115 OS Mus musculus GN Uso1 PE 1 SV 2
blastp_uniprot_sprot sp|P25386|USO1_YEAST 131 205 + 75 none 4.19 1790 53.33 2e-17 Intracellular protein transport protein USO1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN USO1 PE 1 SV 2
blastp_uniprot_sprot sp|Q09857|USO1_SCHPO 134 217 + 84 Gaps:3 7.59 1067 45.68 2e-13 Intracellular protein transport protein uso1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN uso1 PE 3 SV 3
blastp_uniprot_sprot sp|O60763|USO1_HUMAN 119 184 + 66 none 6.86 962 51.52 7e-12 General vesicular transport factor p115 OS Homo sapiens GN USO1 PE 1 SV 2
blastp_uniprot_sprot sp|P41541|USO1_BOVIN 132 184 + 53 none 5.52 961 60.38 8e-12 General vesicular transport factor p115 OS Bos taurus GN USO1 PE 1 SV 1
blastp_uniprot_sprot sp|P41542|USO1_RAT 132 184 + 53 none 5.53 959 58.49 1e-11 General vesicular transport factor p115 OS Rattus norvegicus GN Uso1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6XJG8|PSD2B_ARATH 277 313 + 37 none 4.15 891 72.97 9e-08 26S proteasome non-ATPase regulatory subunit 2 homolog B OS Arabidopsis thaliana GN RPN1B PE 1 SV 1
blastp_uniprot_sprot sp|Q9SIV2|PSD2A_ARATH 277 313 + 37 none 4.15 891 72.97 2e-07 26S proteasome non-ATPase regulatory subunit 2 homolog A OS Arabidopsis thaliana GN RPN1A PE 1 SV 2
rpsblast_kog gnl|CDD|36164 131 205 + 75 none 7.73 970 60.00 7e-23 KOG0946 KOG0946 KOG0946 ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37216 277 310 + 34 none 3.87 878 73.53 2e-08 KOG2005 KOG2005 KOG2005 26S proteasome regulatory complex subunit RPN1/PSMD2 [Posttranslational modification protein turnover chaperones].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 134 230 97 G3DSA:1.25.10.10 none none IPR011989
PANTHER 133 217 85 PTHR10013 none none IPR024095
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 131 216 86 SSF48371 none none IPR016024
Phobius 21 313 293 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 8 15 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 4 0.607 0.112 NON-PLANT 20